RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 DEPPQ9NTK1 212 aa11.36□□□□□ -0.59
PRPF8-208ENST00000573716 ACAD8Q9UKU7 415 aa11.36□□□□□ -0.59
PRPF8-208ENST00000573716 FAM215AQ9Y5M1 114 aa11.36□□□□□ -0.59
PRPF8-208ENST00000573716 LIPGQ9Y5X9 500 aa11.36□□□□□ -0.59
PRPF8-208ENST00000573716 FN1P02751 2386 aaKnown RBP11.36□□□□□ -0.59
PRPF8-208ENST00000573716 EML6Q6ZMW3 1958 aa11.36□□□□□ -0.59
PRPF8-208ENST00000573716 A0A0G2JMM0 328 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 A0A1W2PPB8 328 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 A0A1W2PRS3 328 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 A8MVJ9 347 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 KIR3DP1A8MWS1 328 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 NDUFS4O43181 175 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 ZBTB14O43829 449 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 LCMT2O60294 686 aaKnown RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 CDH1P12830 882 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 IMPA1P29218 277 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 SSR4P51571 173 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 CLCN2P51788 898 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 TBPL1P62380 186 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 MEF2AQ02078 507 aaPredicted RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 TTLL9Q3SXZ7 439 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 FLYWCH1Q4VC44 716 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 C1orf185Q5T7R7 199 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 RTL6Q6ICC9 239 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 IL20RBQ6UXL0 311 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 CHSY3Q70JA7 882 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 SLC22A16Q86VW1 577 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 C17orf64Q86WR6 236 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 LRRC56Q8IYG6 542 aaPredicted RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 PRELID2Q8N945 189 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 PSD4Q8NDX1 1056 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 ARMC2Q8NEN0 867 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 NFAM1Q8NET5 270 aaPredicted RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 OR2M7Q8NG81 312 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 NANOS1Q8WY41 292 aaKnown RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 TM4SF19Q96DZ7 209 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 SLC30A3Q99726 388 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 CCDC77Q9BR77 488 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 LDAHQ9H6V9 325 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 LIN28AQ9H9Z2 209 aaKnown RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 TREX1Q9NSU2 369 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 HPF1Q9NWY4 346 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 PACSIN2Q9UNF0 486 aaPredicted RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 ZNF148Q9UQR1 794 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 DRG1Q9Y295 367 aaKnown RBP11.35□□□□□ -0.59
PRPF8-208ENST00000573716 SLC22A7Q9Y694 548 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 CSPG4Q6UVK1 2322 aa11.35□□□□□ -0.59
PRPF8-208ENST00000573716 PSMD12O00232 456 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-208ENST00000573716 OR1F1O43749 312 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 CEP104O60308 925 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 GALR3O60755 368 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-208ENST00000573716 MYO1DO94832 1006 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ATE1O95260 518 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 HEXAP06865 529 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 F7P08709 466 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ZNF888P0CJ79 500 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ALOX12P18054 663 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 HNF4AP41235 474 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 SKP1P63208 163 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 SNX1Q13596 522 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 C16orf47Q6ZP98 133 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-208ENST00000573716 UBE2R2Q712K3 238 aaPredicted RBP11.34□□□□□ -0.59
PRPF8-208ENST00000573716 UBL4BQ8N7F7 174 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 MFSD9Q8NBP5 474 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ZNF740Q8NDX6 193 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 B3GNT7Q8NFL0 401 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ASB11Q8WXH4 323 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ASB15Q8WXK1 588 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 MFSD3Q96ES6 412 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 CNPPD1Q9BV87 410 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 TTTY12Q9BZ98 90 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 NEUROD4Q9HD90 331 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 NECTIN3Q9NQS3 549 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 PNO1Q9NRX1 252 aaKnown RBP11.34□□□□□ -0.59
PRPF8-208ENST00000573716 BFARQ9NZS9 450 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 AMFRQ9UKV5 643 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 CBLCQ9ULV8 474 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 MPDZO75970 2070 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ARHGAP21Q5T5U3 1957 aa11.34□□□□□ -0.59
PRPF8-208ENST00000573716 ATP6AP2A0A1C7CYW4 349 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 OR14I1A6ND48 311 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 ATP6AP2O75787 350 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 OR2J2O76002 312 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 LY6G6DO95868 133 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 MGAT1P26572 445 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 ARNTP27540 789 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 STIP1P31948 543 aaKnown RBP11.33□□□□□ -0.6
PRPF8-208ENST00000573716 CYLC1P35663 651 aaPredicted RBP11.33□□□□□ -0.6
PRPF8-208ENST00000573716 MAGEA5P43359 124 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 MAN2A2P49641 1150 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 CLCN7P51798 805 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 KLF1Q13351 362 aaPredicted RBP11.33□□□□□ -0.6
PRPF8-208ENST00000573716 WLSQ5T9L3 541 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 HECTD2Q5U5R9 776 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 MBOAT1Q6ZNC8 495 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 QSOX2Q6ZRP7 698 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 TRILQ7L0X0 811 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 PIWIL4Q7Z3Z4 852 aaKnown RBP11.33□□□□□ -0.6
PRPF8-208ENST00000573716 PEX26Q7Z412 305 aa11.33□□□□□ -0.6
PRPF8-208ENST00000573716 VWA5B2Q8N398 1253 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms