RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 NAE1Q13564 534 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 ARMC10Q8N2F6 343 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 OR5M9Q8NGP3 310 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 OR10Q1Q8NGQ4 319 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 FAM129AQ9BZQ8 928 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 SLC24A3Q9HC58 644 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 PNPLA3Q9NST1 481 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 DEPPQ9NTK1 212 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 KLHL42Q9P2K6 505 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 ST6GALNAC2Q9UJ37 374 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 FBXW2Q9UKT8 454 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 DHRS7Q9Y394 339 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 L3MBTL1Q9Y468 752 aa18.52■□□□□ 0.56
CCDC40-206ENST00000572083 ZNF407Q9C0G0 2248 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 ABCA4P78363 2273 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 TCRBV16S1A1N1A0A5B0 115 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 FAM166BA8MTA8 275 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 OR1F1O43749 312 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 CASC4Q6P4E1 433 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 AGTRAPQ6RW13 159 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 ZZZ3Q8IYH5 903 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 APCDD1LQ8NCL9 501 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 POLDIP3Q9BY77 421 aaKnown RBP18.51■□□□□ 0.55
CCDC40-206ENST00000572083 SLC6A16Q9GZN6 736 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 NECTIN3Q9NQS3 549 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 ZNF358Q9NW07 568 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 KCMF1Q9P0J7 381 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 PDE10AQ9Y233 779 aa18.51■□□□□ 0.55
CCDC40-206ENST00000572083 IGKV3D-11A0A0A0MRZ8 115 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 A0A1B0GTL3 188 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 PINLYPA6NC86 204 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 TMEM200CA6NKL6 621 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 SLC16A5O15375 505 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 CTAG2O75638 210 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 FAM155BO75949 473 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 DLX5P56178 289 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 SKP1P63208 163 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 KIF5AQ12840 1032 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 SNTB1Q13884 538 aaKnown RBP18.5■□□□□ 0.55
CCDC40-206ENST00000572083 GXYLT1Q4G148 440 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 LCTLQ6UWM7 567 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 GSTA5Q7RTV2 222 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.5■□□□□ 0.55
CCDC40-206ENST00000572083 ZNF669Q96BR6 464 aaPredicted RBP18.5■□□□□ 0.55
CCDC40-206ENST00000572083 PWWP2AQ96N64 755 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 GPATCH1Q9BRR8 931 aaKnown RBP18.5■□□□□ 0.55
CCDC40-206ENST00000572083 DESI2Q9BSY9 194 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 RHBGQ9H310 441 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 TIMMDC1Q9NPL8 285 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 DLL4Q9NR61 685 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 PLEKHA6Q9Y2H5 1048 aa18.5■□□□□ 0.55
CCDC40-206ENST00000572083 DNAJC13O75165 2243 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 MYO1DO94832 1006 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 TUBB4AP04350 444 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 TPSB2P20231 275 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 SLC1A2P43004 574 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 CLCN2P51788 898 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 PPIAP62937 165 aaKnown RBP18.49■□□□□ 0.55
CCDC40-206ENST00000572083 PLGLB1Q02325 96 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 PWP1Q13610 501 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 THOC5Q13769 683 aaKnown RBP18.49■□□□□ 0.55
CCDC40-206ENST00000572083 DHX34Q14147 1143 aaKnown RBP18.49■□□□□ 0.55
CCDC40-206ENST00000572083 SIX1Q15475 284 aaPredicted RBP18.49■□□□□ 0.55
CCDC40-206ENST00000572083 TPSAB1Q15661 275 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 ZNF585AQ6P3V2 769 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 PAOXQ6QHF9 649 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 PSD4Q8NDX1 1056 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 B3GNT7Q8NFL0 401 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 SGPP1Q9BX95 441 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 TSGA10Q9BZW7 698 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 PRDM9Q9NQV7 894 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 ZNF223Q9UK11 482 aaPredicted RBP18.49■□□□□ 0.55
CCDC40-206ENST00000572083 ERVK-11Q9UQG0 969 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 LIPGQ9Y5X9 500 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 FBN3Q75N90 2809 aa18.49■□□□□ 0.55
CCDC40-206ENST00000572083 A0A0G2JMM0 328 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 A0A1W2PPB8 328 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 A0A1W2PRS3 328 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 KIR3DP1A8MWS1 328 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 PSMD12O00232 456 aaPredicted RBP18.48■□□□□ 0.55
CCDC40-206ENST00000572083 NPPBP16860 134 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 CCND1P24385 295 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 ACVR2AP27037 513 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 HNF4AP41235 474 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 SSR4P51571 173 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 CCR8P51685 355 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 RGS1Q08116 209 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 C4orf22Q6V702 233 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 C16orf47Q6ZP98 133 aaPredicted RBP18.48■□□□□ 0.55
CCDC40-206ENST00000572083 ABHD13Q7L211 337 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 UTP15Q8TED0 518 aaKnown RBP18.48■□□□□ 0.55
CCDC40-206ENST00000572083 PYCR2Q96C36 320 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 RMND5BQ96G75 393 aaPredicted RBP18.48■□□□□ 0.55
CCDC40-206ENST00000572083 SMC6Q96SB8 1091 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 TTYH2Q9BSA4 534 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 SPNS1Q9H2V7 528 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 CLEC4MQ9H2X3 399 aaPredicted RBP18.48■□□□□ 0.55
CCDC40-206ENST00000572083 SAMD15Q9P1V8 674 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 FAM215AQ9Y5M1 114 aa18.48■□□□□ 0.55
CCDC40-206ENST00000572083 A0A0G2JNJ9 132 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms