RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ZRSR2Q15696 482 aaKnown RBP12.64□□□□□ -0.39
CCDC40-205ENST00000571028 HIST2H2ACQ16777 129 aaPredicted RBP12.64□□□□□ -0.39
CCDC40-205ENST00000571028 HKDC1Q2TB90 917 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 PRAMEF9Q5VWM5 478 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 HIST2H2AA3Q6FI13 130 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 GDF7Q7Z4P5 450 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 RAB43Q86YS6 212 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 SLC22A9Q8IVM8 553 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 GOLGA6L1Q8N7Z2 621 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 ANKRD42Q8N9B4 389 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 CLEC1AQ8NC01 280 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 ADAMTS17Q8TE56 1095 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 PGM2Q96G03 612 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 CDK15Q96Q40 435 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 TMEM237Q96Q45 408 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 OR2A5Q96R48 311 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 NLNQ9BYT8 704 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 CHRNA10Q9GZZ6 450 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 STMN4Q9H169 189 aaPredicted RBP12.64□□□□□ -0.39
CCDC40-205ENST00000571028 ACTR8Q9H981 624 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 GPRC5BQ9NZH0 403 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 SENP1Q9P0U3 644 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 PCTPQ9UKL6 214 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 OSGIN2Q9Y236 505 aa12.64□□□□□ -0.39
CCDC40-205ENST00000571028 TRBC2A0A5B9 178 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 HYKKA2RU49 373 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 AGPSO00116 658 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 P2RX6O15547 441 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 SRPX2O60687 465 aaPredicted RBP12.63□□□□□ -0.39
CCDC40-205ENST00000571028 SH3BGRLO75368 114 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 CD22P20273 847 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 PIK3CGP48736 1102 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 PRKAA2P54646 552 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 MAGOHP61326 146 aaKnown RBP12.63□□□□□ -0.39
CCDC40-205ENST00000571028 HERVK_113P63132 956 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 GPS2Q13227 327 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 DDX39BQ13838 428 aaKnown RBP12.63□□□□□ -0.39
CCDC40-205ENST00000571028 GRM7Q14831 915 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 UNC50Q53HI1 259 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 TCTE1Q5JU00 501 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 CFAP157Q5JU67 520 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 ZNF678Q5SXM1 525 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 ATG9BQ674R7 924 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 TLDC1Q6P9B6 456 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 TTLL10Q6ZVT0 673 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 ASPGQ86U10 573 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 C10orf107Q8IVU9 208 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 KRT78Q8N1N4 520 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 ZADH2Q8N4Q0 377 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 DTWD1Q8N5C7 304 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 MFSD9Q8NBP5 474 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 OR4K1Q8NGD4 311 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 ZCCHC10Q8TBK6 192 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 TRPC4APQ8TEL6 797 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 SLC13A3Q8WWT9 602 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 ARL8AQ96BM9 186 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 PTCD3Q96EY7 689 aaKnown RBP12.63□□□□□ -0.39
CCDC40-205ENST00000571028 PAIP2Q9BPZ3 127 aaKnown RBP12.63□□□□□ -0.39
CCDC40-205ENST00000571028 MECRQ9BV79 373 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 CUTCQ9NTM9 273 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 TXLNGQ9NUQ3 528 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 MKS1Q9NXB0 559 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 MID2Q9UJV3 735 aa12.63□□□□□ -0.39
CCDC40-205ENST00000571028 RUVBL1Q9Y265 456 aaKnown RBP12.63□□□□□ -0.39
CCDC40-205ENST00000571028 PCM1Q15154 2024 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 SNRNP200O75643 2136 aaKnown RBP12.62□□□□□ -0.39
CCDC40-205ENST00000571028 WDR91A4D1P6 747 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 MEN1O00255 615 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 PPP6CO00743 305 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 NDUFS4O43181 175 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 ZG16O60844 167 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
CCDC40-205ENST00000571028 IMPDH1P20839 514 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 CXCR2P25025 360 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 ITGA3P26006 1051 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 ALDH3A1P30838 453 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 OTX2P32243 289 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 CCNG1P51959 295 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 NAGLUP54802 743 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 CLCQ05315 142 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 SLC9A5Q14940 896 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC40-205ENST00000571028 PAGE2BQ5JRK9 111 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 FAM219BQ5XKK7 198 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 TTC19Q6DKK2 380 aaPredicted RBP12.62□□□□□ -0.39
CCDC40-205ENST00000571028 ADNP2Q6IQ32 1131 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 TMIGD1Q6UXZ0 262 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 VN1R4Q7Z5H5 301 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 MILR1Q7Z6M3 343 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC40-205ENST00000571028 SLC38A9Q8NBW4 561 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 CAMKVQ8NCB2 501 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 OR52B6Q8NGF0 335 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 RDH11Q8TC12 318 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 MGARPQ8TDB4 240 aa12.62□□□□□ -0.39
CCDC40-205ENST00000571028 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
CCDC40-205ENST00000571028 MTFMTQ96DP5 389 aaKnown RBP12.62□□□□□ -0.39
CCDC40-205ENST00000571028 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms