RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 REEP5Q00765 189 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 RBBP5Q15291 538 aaKnown RBP12.8□□□□□ -0.36
CNOT1-215ENST00000569020 TMPRSS11BQ86T26 416 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 THOC6Q86W42 341 aaKnown RBP12.8□□□□□ -0.36
CNOT1-215ENST00000569020 IGDCC3Q8IVU1 814 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 EID3Q8N140 333 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 PDIK1LQ8N165 341 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 KIF2BQ8N4N8 673 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 ADAMTS18Q8TE60 1221 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 SLCO2A1Q92959 643 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 CFAP36Q96G28 342 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 PDLIM5Q96HC4 596 aaKnown RBP12.8□□□□□ -0.36
CNOT1-215ENST00000569020 TSNARE1Q96NA8 513 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 SLC6A16Q9GZN6 736 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 DDX47Q9H0S4 455 aaKnown RBP12.8□□□□□ -0.36
CNOT1-215ENST00000569020 SPNS1Q9H2V7 528 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 PRDM9Q9NQV7 894 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 CHMP2BQ9UQN3 213 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 KCNE2Q9Y6J6 123 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 CENPEQ02224 2701 aa12.8□□□□□ -0.36
CNOT1-215ENST00000569020 TCRBV16S1A1N1A0A5B0 115 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 RNH1P13489 461 aaKnown RBP12.79□□□□□ -0.36
CNOT1-215ENST00000569020 MAOAP21397 527 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 ELK3P41970 407 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 MLF1P58340 268 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 HP1BP3Q5SSJ5 553 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-215ENST00000569020 ZNF468Q5VIY5 522 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-215ENST00000569020 SBSNQ6UWP8 590 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 SIAH3Q8IW03 269 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 NKAPQ8N5F7 415 aaKnown RBP12.79□□□□□ -0.36
CNOT1-215ENST00000569020 CPSF7Q8N684 471 aaKnown RBP12.79□□□□□ -0.36
CNOT1-215ENST00000569020 ANKRD53Q8N9V6 530 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 MTFMTQ96DP5 389 aaKnown RBP12.79□□□□□ -0.36
CNOT1-215ENST00000569020 PDLIM2Q96JY6 352 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 OLFM1Q99784 485 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 EGFL8Q99944 293 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 DEFB126Q9BYW3 111 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 RHBGQ9H310 441 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 TRIM45Q9H8W5 580 aaPredicted RBP12.79□□□□□ -0.36
CNOT1-215ENST00000569020 SNX12Q9UMY4 172 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 SLC22A14Q9Y267 594 aa12.79□□□□□ -0.36
CNOT1-215ENST00000569020 A8MUA0 341 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 KLRC4-KLRK1H3BQV0 150 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 PRRG2O14669 202 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 ZSCAN12O43309 604 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 SERPINA6P08185 405 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 SMIM10L1P0DMW3 83 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 ZNF37AP17032 561 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-215ENST00000569020 SAT1P21673 171 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 TRHRP34981 398 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-215ENST00000569020 HLCSP50747 726 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 CLCN2P51788 898 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 ITGA8P53708 1063 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 STXBP1P61764 594 aaKnown RBP12.78□□□□□ -0.36
CNOT1-215ENST00000569020 HSF1Q00613 529 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 HYAL2Q12891 473 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 MORF4L2Q15014 288 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 PPP1R3AQ16821 1122 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 TOR1AIP1Q5JTV8 583 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 NXPE4Q6UWF7 544 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 CA13Q8N1Q1 262 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 AGAP11Q8TF27 550 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
CNOT1-215ENST00000569020 ANKRD7Q92527 254 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 LRRC39Q96DD0 335 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 SMIM10Q96HG1 83 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 FAR2Q96K12 515 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 TRIM51Q9BSJ1 452 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 KLHL31Q9H511 634 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 NECTIN3Q9NQS3 549 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 ZFATQ9P243 1243 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 IKZF3Q9UKT9 509 aa12.78□□□□□ -0.36
CNOT1-215ENST00000569020 KLF13Q9Y2Y9 288 aaPredicted RBP12.78□□□□□ -0.36
CNOT1-215ENST00000569020 IGKV3D-11A0A0A0MRZ8 115 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 H2AFYO75367 372 aaKnown RBP12.77□□□□□ -0.37
CNOT1-215ENST00000569020 IVDP26440 423 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 HNMTP50135 292 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 CDKL1Q00532 357 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 TRMT10BQ6PF06 316 aaKnown RBP12.77□□□□□ -0.37
CNOT1-215ENST00000569020 SYDE1Q6ZW31 735 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-215ENST00000569020 FRA10AC1Q70Z53 315 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 POGLUT1Q8NBL1 392 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 NFAM1Q8NET5 270 aaPredicted RBP12.77□□□□□ -0.37
CNOT1-215ENST00000569020 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 LURAP1Q96LR2 239 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 TRIM8Q9BZR9 551 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 PLAC1Q9HBJ0 212 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 MMACHCQ9Y4U1 282 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 OARD1Q9Y530 152 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 TEX264Q9Y6I9 313 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 CACNA1CQ13936 2221 aa12.77□□□□□ -0.37
CNOT1-215ENST00000569020 PCNX1Q96RV3 2341 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 A0A088AWK7 358 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 TRBV11-1A0A0K0K1C0 115 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 FAM95CA0A1B0GW59 222 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 CTAGE15A4D2H0 777 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 NPEPPSL1A6NEC2 478 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 E9PLN8 166 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 CDC7O00311 574 aa12.76□□□□□ -0.37
CNOT1-215ENST00000569020 TFECO14948 347 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms