RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 FAM83EQ2M2I3 478 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 CRB2Q5IJ48 1285 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 RIPOR1Q6ZS17 1223 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 LRRC70Q7Z2Q7 622 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 CISD2Q8N5K1 135 aaKnown RBP16.52■□□□□ 0.24
EDC3-215ENST00000569007 SIRT6Q8N6T7 355 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 GALNT11Q8NCW6 608 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 TTLQ8NG68 377 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 DNAJB14Q8TBM8 379 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 PPP4R1Q8TF05 950 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 SLC44A1Q8WWI5 657 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 CCT6BQ92526 530 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 TSLPQ969D9 159 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 C19orf60Q96EN9 201 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 SMIM10Q96HG1 83 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 LMF1Q96S06 567 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 PITHD1Q9GZP4 211 aaPredicted RBP16.52■□□□□ 0.24
EDC3-215ENST00000569007 PTGFRNQ9P2B2 879 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 VPS4AQ9UN37 437 aa16.52■□□□□ 0.24
EDC3-215ENST00000569007 COL12A1Q99715 3063 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 SHANK1Q9Y566 2161 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 B4GALT2O60909 372 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 WFS1O76024 890 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 INHBAP08476 426 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 ITGAMP11215 1152 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 ICAM2P13598 275 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 CD22P20273 847 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 GSTM2P28161 218 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 TYK2P29597 1187 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 HNRNPH1P31943 449 aaKnown RBP16.51■□□□□ 0.23
EDC3-215ENST00000569007 SOX11P35716 441 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 STXBP1P61764 594 aaKnown RBP16.51■□□□□ 0.23
EDC3-215ENST00000569007 IRF8Q02556 426 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 ADNP2Q6IQ32 1131 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 VN1R5Q7Z5H4 357 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 PLPP5Q8NEB5 264 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 UHMK1Q8TAS1 419 aaKnown RBP16.51■□□□□ 0.23
EDC3-215ENST00000569007 UBTD2Q8WUN7 234 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 SNRNP40Q96DI7 357 aaKnown RBP16.51■□□□□ 0.23
EDC3-215ENST00000569007 WDR34Q96EX3 536 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 PTCD3Q96EY7 689 aaKnown RBP16.51■□□□□ 0.23
EDC3-215ENST00000569007 SEC16BQ96JE7 1060 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 CNDP1Q96KN2 507 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 EFCAB11Q9BUY7 163 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 CLK4Q9HAZ1 481 aaKnown RBP16.51■□□□□ 0.23
EDC3-215ENST00000569007 ZNF490Q9ULM2 529 aaPredicted RBP16.51■□□□□ 0.23
EDC3-215ENST00000569007 PCDHGA10Q9Y5H3 936 aa16.51■□□□□ 0.23
EDC3-215ENST00000569007 A0A0G2JN53 185 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 LRIT2A6NDA9 550 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 ANKDD1BA6NHY2 528 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 SYCE1LA8MT33 242 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 MAGEB17A8MXT2 336 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 K7EPI3 171 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 CLEC3AO75596 197 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 UQCRHP07919 91 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 RNH1P13489 461 aaKnown RBP16.5■□□□□ 0.23
EDC3-215ENST00000569007 MTHFD2P13995 350 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 JAK1P23458 1154 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 UQCRFS1P47985 274 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 BTN3A2P78410 334 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 CHIT1Q13231 466 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 SFT2D3Q587I9 215 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 RHEBL1Q8TAI7 183 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 GAL3ST3Q96A11 431 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 MS4A6EQ96DS6 147 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 GPR78Q96P69 363 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 PAFAH2Q99487 392 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 VPS11Q9H270 941 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 RHBGQ9H310 441 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 OPTCQ9UBM4 332 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 NFU1Q9UMS0 254 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 IKBKGQ9Y6K9 419 aa16.5■□□□□ 0.23
EDC3-215ENST00000569007 PSMD12O00232 456 aaPredicted RBP16.49■□□□□ 0.23
EDC3-215ENST00000569007 ERI3O43414 337 aaKnown RBP16.49■□□□□ 0.23
EDC3-215ENST00000569007 KLHL2O95198 593 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 TBX6O95947 436 aaPredicted RBP16.49■□□□□ 0.23
EDC3-215ENST00000569007 GNLYP22749 145 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 AP2B1P63010 937 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 ACTN3Q08043 901 aaPredicted RBP16.49■□□□□ 0.23
EDC3-215ENST00000569007 LAPTM5Q13571 262 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 ACAP2Q15057 778 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 TBCCQ15814 346 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 BTBD16Q32M84 506 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 PAGE2BQ5JRK9 111 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 B3GNTL1Q67FW5 361 aaPredicted RBP16.49■□□□□ 0.23
EDC3-215ENST00000569007 PLAG1Q6DJT9 500 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 KLC3Q6P597 504 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 PAPD4Q6PIY7 484 aaKnown RBP16.49■□□□□ 0.23
EDC3-215ENST00000569007 IFT20Q8IY31 132 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 CA13Q8N1Q1 262 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 CATSPER1Q8NEC5 780 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 FAR2Q96K12 515 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 ASF1BQ9NVP2 202 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 PLA2G3Q9NZ20 509 aa16.49■□□□□ 0.23
EDC3-215ENST00000569007 SCN2AQ99250 2005 aa16.48■□□□□ 0.23
EDC3-215ENST00000569007 CCDC189A1A4V9 331 aa16.48■□□□□ 0.23
EDC3-215ENST00000569007 FAM227AF5H4B4 570 aa16.48■□□□□ 0.23
EDC3-215ENST00000569007 POC1B-GALNT4F8VUJ3 575 aa16.48■□□□□ 0.23
EDC3-215ENST00000569007 PRMT3O60678 531 aa16.48■□□□□ 0.23
EDC3-215ENST00000569007 RHOXF2BP0C7M4 288 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms