RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SEC16BQ96JE7 1060 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 CPNE1Q99829 537 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 PITHD1Q9GZP4 211 aaPredicted RBP18.94■□□□□ 0.62
CLN6-207ENST00000566347 DPH5Q9H2P9 285 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 CNOT10Q9H9A5 744 aaKnown RBP18.94■□□□□ 0.62
CLN6-207ENST00000566347 GPRC5BQ9NZH0 403 aa18.94■□□□□ 0.62
CLN6-207ENST00000566347 MTO1Q9Y2Z2 717 aaKnown RBP18.94■□□□□ 0.62
CLN6-207ENST00000566347 CRYBG3Q68DQ2 2970 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 ITPR2Q14571 2701 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 CTAGE15A4D2H0 777 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 WISP3O95389 354 aaPredicted RBP18.93■□□□□ 0.62
CLN6-207ENST00000566347 GSTA2P09210 222 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 COL8A1P27658 744 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 GDF5P43026 501 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 MRPS25P82663 173 aaKnown RBP18.93■□□□□ 0.62
CLN6-207ENST00000566347 OR1C1Q15619 314 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 ZRSR2Q15696 482 aaKnown RBP18.93■□□□□ 0.62
CLN6-207ENST00000566347 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.93■□□□□ 0.62
CLN6-207ENST00000566347 TOR1AIP1Q5JTV8 583 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 CDKL4Q5MAI5 379 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 TMIGD1Q6UXZ0 262 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 CTAGE6Q86UF2 777 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 FJX1Q86VR8 437 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 KRT78Q8N1N4 520 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 MDS2Q8NDY4 140 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 ARMC2Q8NEN0 867 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 ELP5Q8TE02 316 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 GAL3ST3Q96A11 431 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 FAR2Q96K12 515 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 GPR22Q99680 433 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 NPAS2Q99743 824 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 KLHL31Q9H511 634 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 PRDM9Q9NQV7 894 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 SEC14L3Q9UDX4 400 aa18.93■□□□□ 0.62
CLN6-207ENST00000566347 CELSR2Q9HCU4 2923 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 CROCCQ5TZA2 2017 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 TCRBV9S1A1TA0A576 114 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 NCF1BA6NI72 391 aaPredicted RBP18.92■□□□□ 0.62
CLN6-207ENST00000566347 GABRR3A8MPY1 467 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 NCF1CA8MVU1 366 aaPredicted RBP18.92■□□□□ 0.62
CLN6-207ENST00000566347 CXorf49A8MYA2 514 aaPredicted RBP18.92■□□□□ 0.62
CLN6-207ENST00000566347 RAD51CO43502 376 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 PIAS1O75925 651 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 UNC5CO95185 931 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 CCDC166P0CW27 439 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 NCF1P14598 390 aaPredicted RBP18.92■□□□□ 0.62
CLN6-207ENST00000566347 CD46P15529 392 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 STMN1P16949 149 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 MST1P26927 711 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 HPDP32754 393 aaPredicted RBP18.92■□□□□ 0.62
CLN6-207ENST00000566347 DCTP40126 519 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 GP5P40197 560 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 CD96P40200 585 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 ATP6V0D1P61421 351 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 RBPJQ06330 500 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 SLBPQ14493 270 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLN6-207ENST00000566347 C1QL3Q5VWW1 255 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 ZNF787Q6DD87 383 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 RPS19BP1Q86WX3 136 aaKnown RBP18.92■□□□□ 0.62
CLN6-207ENST00000566347 GPSM1Q86YR5 675 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.92■□□□□ 0.62
CLN6-207ENST00000566347 CYP4X1Q8N118 509 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 CA13Q8N1Q1 262 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 TMEM178AQ8NBL3 297 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 SIGLEC12Q96PQ1 595 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 RBBP8Q99708 897 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 PHACTR1Q9C0D0 580 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 EHD1Q9H4M9 534 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 NT5DC2Q9H857 520 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 CAB39LQ9H9S4 337 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 WWOXQ9NZC7 414 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 COPG2Q9UBF2 871 aa18.92■□□□□ 0.62
CLN6-207ENST00000566347 A0A088AWK7 358 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 IGKV3D-11A0A0A0MRZ8 115 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 TCRBV16S1A1N1A0A5B0 115 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 SAGE2PA6NJ88 616 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 FAM159BA6NKW6 160 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 ZG16O60844 167 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 MLYCDO95822 493 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 MAOAP21397 527 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 ZNF10P21506 573 aaPredicted RBP18.91■□□□□ 0.62
CLN6-207ENST00000566347 EEF1DP29692 281 aaKnown RBP18.91■□□□□ 0.62
CLN6-207ENST00000566347 GGT5P36269 586 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 BTN3A2P78410 334 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 BTG2P78543 158 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 CAV1Q03135 178 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 C18orf21Q32NC0 220 aaPredicted RBP18.91■□□□□ 0.62
CLN6-207ENST00000566347 SULT1C3Q6IMI6 304 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 C3orf62Q6ZUJ4 267 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 SCMH1Q96GD3 660 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 NPLQ9BXD5 320 aaPredicted RBP18.91■□□□□ 0.62
CLN6-207ENST00000566347 UNKQ9C0B0 810 aaKnown RBP18.91■□□□□ 0.62
CLN6-207ENST00000566347 RHBGQ9H310 441 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 CDCP1Q9H5V8 836 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 DNAJC11Q9NVH1 559 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 ANKRD10Q9NXR5 420 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 GRHL1Q9NZI5 618 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 UTP11Q9Y3A2 253 aaKnown RBP18.91■□□□□ 0.62
CLN6-207ENST00000566347 MMACHCQ9Y4U1 282 aa18.91■□□□□ 0.62
CLN6-207ENST00000566347 CACNA1DQ01668 2161 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms