RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 PCDHGB6Q9Y5F9 930 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 PCNX1Q96RV3 2341 aa17.19■□□□□ 0.34
USB1-213ENST00000566292 URADA6NGE7 173 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 GABRR3A8MPY1 467 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 FAM227AF5H4B4 570 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 PRMT3O60678 531 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 WDR47O94967 919 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 SERPINA6P08185 405 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 SSTR1P30872 391 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 OR1C1Q15619 314 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 TOR1AIP1Q5JTV8 583 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 SPINK14Q6IE38 97 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 SLCO4C1Q6ZQN7 724 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 FRA10AC1Q70Z53 315 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.18■□□□□ 0.34
USB1-213ENST00000566292 SLC5A8Q8N695 610 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 SCMH1Q96GD3 660 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 UTP23Q9BRU9 249 aaKnown RBP17.18■□□□□ 0.34
USB1-213ENST00000566292 DERL2Q9GZP9 239 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 DPH5Q9H2P9 285 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 CDCP1Q9H5V8 836 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 CLK4Q9HAZ1 481 aaKnown RBP17.18■□□□□ 0.34
USB1-213ENST00000566292 NECTIN3Q9NQS3 549 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 KLHL1Q9NR64 748 aa17.18■□□□□ 0.34
USB1-213ENST00000566292 MYO9AB2RTY4 2548 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 GTF3C1Q12789 2109 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 LRBAP50851 2863 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 IGKV3D-11A0A0A0MRZ8 115 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 NCF1BA6NI72 391 aaPredicted RBP17.17■□□□□ 0.34
USB1-213ENST00000566292 NCF1CA8MVU1 366 aaPredicted RBP17.17■□□□□ 0.34
USB1-213ENST00000566292 TAPBPO15533 448 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 C1GALT1C1LP0DN25 315 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 RNH1P13489 461 aaKnown RBP17.17■□□□□ 0.34
USB1-213ENST00000566292 NCF1P14598 390 aaPredicted RBP17.17■□□□□ 0.34
USB1-213ENST00000566292 GNAZP19086 355 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 MAOAP21397 527 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 POU4F1Q01851 419 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 TGFBIQ15582 683 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 ZNF468Q5VIY5 522 aaPredicted RBP17.17■□□□□ 0.34
USB1-213ENST00000566292 CYP4X1Q8N118 509 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 LGI4Q8N135 537 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 CA13Q8N1Q1 262 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 SPATA6LQ8N4H0 392 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 BBOF1Q8ND07 529 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 PYROXD1Q8WU10 500 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 ERP44Q9BS26 406 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 TMEM79Q9BSE2 394 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 RHBGQ9H310 441 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 SAYSD1Q9NPB0 183 aa17.17■□□□□ 0.34
USB1-213ENST00000566292 TCRBV16S1A1N1A0A5B0 115 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 SAGE2PA6NJ88 616 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 NDC80O14777 642 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 PHGDHO43175 533 aaKnown RBP17.16■□□□□ 0.34
USB1-213ENST00000566292 NEURL1O76050 574 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 TAS2R50P59544 299 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 SLBPQ14493 270 aaKnown RBP eCLIP17.16■□□□□ 0.34
USB1-213ENST00000566292 FBXO48Q5FWF7 155 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 RPS19BP1Q86WX3 136 aaKnown RBP17.16■□□□□ 0.34
USB1-213ENST00000566292 NFAM1Q8NET5 270 aaPredicted RBP17.16■□□□□ 0.34
USB1-213ENST00000566292 PRDM9Q9NQV7 894 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 GRHL1Q9NZI5 618 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 WHRNQ9P202 907 aa17.16■□□□□ 0.34
USB1-213ENST00000566292 NCOA6Q14686 2063 aaPredicted RBP17.16■□□□□ 0.34
USB1-213ENST00000566292 CREBBPQ92793 2442 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 TRGV8A0A0C4DH27 118 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 A0A0G2JN53 185 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 TCRBV9S1A1TA0A576 114 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 ASPDHA6ND91 283 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 FAM187AA6NFU0 413 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 A8MUA0 341 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 PSMD12O00232 456 aaPredicted RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 EIF3HO15372 352 aaKnown RBP eCLIP17.15■□□□□ 0.34
USB1-213ENST00000566292 RAD51CO43502 376 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 PRAMEF4O60810 478 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 H2AFYO75367 372 aaKnown RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 TBX6O95947 436 aaPredicted RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 C1QAP02745 245 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 CCDC166P0CW27 439 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 CD46P15529 392 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 TPP2P29144 1249 aaPredicted RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 HNRNPH1P31943 449 aaKnown RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 CA7P43166 264 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 SLC12A2P55011 1212 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 STXBP1P61764 594 aaKnown RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 BTN3A2P78410 334 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 OC90Q02509 493 aaPredicted RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 CALCOCO2Q13137 446 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 RUNX2Q13950 521 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 PRAMEF9Q5VWM5 478 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 TMIGD1Q6UXZ0 262 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 SPATA4Q8NEY3 305 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 ITLN2Q8WWU7 325 aaPredicted RBP17.15■□□□□ 0.34
USB1-213ENST00000566292 GAL3ST3Q96A11 431 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 MS4A6EQ96DS6 147 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 GPR22Q99680 433 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 RBBP8Q99708 897 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 COPG2Q9UBF2 871 aa17.15■□□□□ 0.34
USB1-213ENST00000566292 LRIT2A6NDA9 550 aa17.14■□□□□ 0.33
USB1-213ENST00000566292 FAM159BA6NKW6 160 aa17.14■□□□□ 0.33
USB1-213ENST00000566292 SP1P08047 785 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms