RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 GALNT11Q8NCW6 608 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 NT5CQ8TCD5 201 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 TSLPQ969D9 159 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 SLC29A3Q9BZD2 475 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 ZNF700Q9H0M5 742 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 ALG9Q9H6U8 611 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 DNAJC11Q9NVH1 559 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 C19orf25Q9UFG5 118 aaPredicted RBP12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 ACOT9Q9Y305 439 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 COPG1Q9Y678 874 aaKnown RBP12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 SLC22A7Q9Y694 548 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 CPAMD8Q8IZJ3 1885 aa12.86□□□□□ -0.35
VPS9D1-204ENST00000565023 RELNP78509 3460 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 A0A096LPK6 155 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 A8MUI8 341 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 SUPT3HB4E1H0 165 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 CHST10O43529 356 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 CCNT2O60583 730 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 GALR3O60755 368 aaPredicted RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 SUPT3HO75486 399 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 SERPINA7P05543 415 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 LTA4HP09960 611 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 C1GALT1C1LP0DN25 315 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 GNAZP19086 355 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 TFEBP19484 476 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 TYK2P29597 1187 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 AHRP35869 848 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 SLC6A12P48065 614 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 ACTN3Q08043 901 aaPredicted RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 PWP1Q13610 501 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 ZNF169Q14929 603 aaPredicted RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 NR6A1Q15406 480 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 CDKL4Q5MAI5 379 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 FCRLBQ6BAA4 426 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 ABHD13Q7L211 337 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 CPEB2Q7Z5Q1 589 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 ANKRD37Q7Z713 158 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 CENPLQ8N0S6 344 aaPredicted RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 OR1N1Q8NGS0 311 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 PRR7Q8TB68 274 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 UTP15Q8TED0 518 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 PPP4R1Q8TF05 950 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 AENQ8WTP8 325 aaKnown RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 KIAA1191Q96A73 305 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 SARGQ9BW04 601 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 NMRAL1Q9HBL8 299 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 NTNG1Q9Y2I2 539 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 PCDHGA10Q9Y5H3 936 aa12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 RP1L1Q8IWN7 2480 aaPredicted RBP12.85□□□□□ -0.35
VPS9D1-204ENST00000565023 SVILO95425 2214 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 LOC102723996A0A087X1L8 192 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 C4orf51C9J302 202 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 STK16O75716 305 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 AGFG2O95081 481 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 FHP07954 510 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 SNRPAP09012 282 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 KCNC1P48547 511 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 OR4D2P58180 307 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 BTN3A2P78410 334 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 IRF9Q00978 393 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 ABRAXAS2Q15018 415 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 NSDHLQ15738 373 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 SFT2D3Q587I9 215 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 XKR6Q5GH73 641 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 CRB2Q5IJ48 1285 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 FHL5Q5TD97 284 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 LGSNQ5TDP6 509 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 SULT1C3Q6IMI6 304 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 ADNP2Q6IQ32 1131 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 SLCO4C1Q6ZQN7 724 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 ISCA2Q86U28 154 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 CYP4X1Q8N118 509 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 TCAIMQ8N3R3 496 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 FAM26EQ8N5C1 309 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 TRPV3Q8NET8 790 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 KCTD4Q8WVF5 259 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 UBLCP1Q8WVY7 318 aaPredicted RBP12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 PSMF1Q92530 271 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 TBC1D20Q96BZ9 403 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 NXNL1Q96CM4 212 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 TUBB6Q9BUF5 446 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 PARD6BQ9BYG5 372 aa12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.84□□□□□ -0.35
VPS9D1-204ENST00000565023 DYTNA2CJ06 578 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 BLACEA4D250 179 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 URADA6NGE7 173 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 A8MUA0 341 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 TRIM49D1C9J1S8 452 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 FAM227AF5H4B4 570 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 UBXN8O00124 270 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 PSMD12O00232 456 aaPredicted RBP12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 SH3BGRLO75368 114 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 KLHL2O95198 593 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 HSD17B3P37058 310 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 AGTR2P50052 363 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 SKP1P63208 163 aa12.83□□□□□ -0.36
VPS9D1-204ENST00000565023 BTG2P78543 158 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms