RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DMXL2Q8TDJ6 3036 aa15.15■□□□□ 0.02
RAB40C-208ENST00000564703 H3BQF6 201 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 PEX12O00623 359 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 OTX2P32243 289 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 RAP1GDS1P52306 607 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 PKNOX1P55347 436 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 MAT1AQ00266 395 aaKnown RBP15.14■□□□□ 0.01
RAB40C-208ENST00000564703 HYAL2Q12891 473 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 LCP2Q13094 533 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 UGT8Q16880 541 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 AP5B1Q2VPB7 878 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 VWA2Q5GFL6 755 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 DEPDC1Q5TB30 811 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 MFSD4BQ5TF39 518 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 GPRIN3Q6ZVF9 776 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 COX15Q7KZN9 410 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 PRSS41Q7RTY9 318 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 C10orf107Q8IVU9 208 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 AFAP1L2Q8N4X5 818 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 GOLGA6L1Q8N7Z2 621 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 AMER3Q8N944 861 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 NACC2Q96BF6 587 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 CRELD1Q96HD1 420 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 F2RL3Q96RI0 385 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 ARHGAP9Q9BRR9 750 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 SOX17Q9H6I2 414 aaPredicted RBP15.14■□□□□ 0.01
RAB40C-208ENST00000564703 ACSS2Q9NR19 701 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 PSD3Q9NYI0 1048 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 HCN3Q9P1Z3 774 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 SLC17A7Q9P2U7 560 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 CTSFQ9UBX1 484 aa15.14■□□□□ 0.01
RAB40C-208ENST00000564703 FREM2Q5SZK8 3169 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 VSTM2BA6NLU5 285 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 PSMD12O00232 456 aaPredicted RBP15.13■□□□□ 0.01
RAB40C-208ENST00000564703 FOXE1O00358 373 aaPredicted RBP15.13■□□□□ 0.01
RAB40C-208ENST00000564703 PPP6CO00743 305 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 FFAR3O14843 346 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 GPR42O15529 346 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 CHST10O43529 356 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 B3GALT2O43825 422 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 SH3BGRLO75368 114 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 RDH16O75452 317 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 CRCPO75575 148 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 OR4F21O95013 312 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 KRT6AP02538 564 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 KRT6BP04259 564 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 HEXBP07686 556 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 SMIM10L1P0DMW3 83 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 CREB1P16220 341 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 HMOX2P30519 316 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 HNRNPH1P31943 449 aaKnown RBP15.13■□□□□ 0.01
RAB40C-208ENST00000564703 KRT6CP48668 564 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 NEK2P51955 445 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 EMP2P54851 167 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 RHDQ02161 417 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 KLC1Q07866 573 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 TRAF3Q13114 568 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 SYT16Q17RD7 645 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 DEFB109BQ30KR1 87 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 GGTA1PQ4G0N0 100 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 SGO1Q5FBB7 561 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 KHDRBS2Q5VWX1 349 aaKnown RBP15.13■□□□□ 0.01
RAB40C-208ENST00000564703 FRG2Q64ET8 278 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 SHISA6Q6ZSJ9 500 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 VN1R5Q7Z5H4 357 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 METTL6Q8TCB7 284 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 RGMAQ96B86 450 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 SMIM10Q96HG1 83 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 CNDP1Q96KN2 507 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 PKNOX2Q96KN3 472 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 KCNC2Q96PR1 638 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 FRG2BQ96QU4 278 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 ZNF382Q96SR6 550 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 TBCDQ9BTW9 1192 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 CRB3Q9BUF7 120 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 MS4A8Q9BY19 250 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 TGIF2Q9GZN2 237 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 MID1IP1Q9NPA3 183 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 SEMA3GQ9NS98 782 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 NMRK1Q9NWW6 199 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 AHSPQ9NZD4 102 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 TRPS1Q9UHF7 1281 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 PTPRQQ9UMZ3 2332 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 LHX6Q9UPM6 363 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 FER1L5A0AVI2 2057 aa15.13■□□□□ 0.01
RAB40C-208ENST00000564703 IGLV3-12A0A075B6K2 115 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 A0A0G2JN53 185 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ZNF860A6NHJ4 632 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 MAGEB17A8MXT2 336 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 TM9SF1O15321 606 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 TYROBPO43914 113 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ULK1O75385 1050 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ITGB2P05107 769 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ENO1P06733 434 aaKnown RBP15.12■□□□□ 0.01
RAB40C-208ENST00000564703 NEFHP12036 1026 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 MMP11P24347 488 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 ALDH3A1P30838 453 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 XCR1P46094 333 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 MTTPP55157 894 aa15.12■□□□□ 0.01
RAB40C-208ENST00000564703 RPS13P62277 151 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms