RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RBCK1Q9BYM8 510 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 ILKAPQ9H0C8 392 aaPredicted RBP17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 COPG2Q9UBF2 871 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 PLAAQ9Y263 795 aa17.31■□□□□ 0.36
SYNGR3-204ENST00000564642 BSNQ9UPA5 3926 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 OR2W5A6NFC9 320 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 K7EPI3 171 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 DNAJB6O75190 326 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 CLEC3AO75596 197 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 SORBS2O94875 1100 aaKnown RBP17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 SERPINA7P05543 415 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 FHP07954 510 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 SMIM10L1P0DMW3 83 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 GFAPP14136 432 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 CD97P48960 835 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 EFNA3P52797 238 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 BTN3A2P78410 334 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 ACTN3Q08043 901 aaPredicted RBP17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 NSDHLQ15738 373 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 RIPOR1Q6ZS17 1223 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 LANCL3Q6ZV70 420 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 ATCAYQ86WG3 371 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 PLPP5Q8NEB5 264 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 UBTD2Q8WUN7 234 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 GAL3ST3Q96A11 431 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 MIB2Q96AX9 1013 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 WDR34Q96EX3 536 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 SMIM10Q96HG1 83 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 LMF1Q96S06 567 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 MAP10Q9P2G4 905 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 ZNF180Q9UJW8 692 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 ZNF490Q9ULM2 529 aaPredicted RBP17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 ASB1Q9Y576 335 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 ANGPTL3Q9Y5C1 460 aa17.3■□□□□ 0.36
SYNGR3-204ENST00000564642 A0A088AWK7 358 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 IGHV3-20A0A0C4DH32 117 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 LRIT2A6NDA9 550 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 PSMD12O00232 456 aaPredicted RBP17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 PRAMEF4O60810 478 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 B4GALT2O60909 372 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 SEC24DO94855 1032 aaPredicted RBP17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 RNH1P13489 461 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 MTHFD2P13995 350 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 EPB42P16452 691 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 ZNF10P21506 573 aaPredicted RBP17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 ABRAXAS2Q15018 415 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 TBCCQ15814 346 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 PFKFB4Q16877 469 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 CRB2Q5IJ48 1285 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 LGSNQ5TDP6 509 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 PRAMEF9Q5VWM5 478 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 IGFL2Q6UWQ7 119 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 LINC00696Q6ZRV3 163 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 TRMT10CQ7L0Y3 403 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 ANKRD37Q7Z713 158 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 Q8NA96 180 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 BRIX1Q8TDN6 353 aaKnown RBP17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 PPP4R1Q8TF05 950 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 DCAKDQ8WVC6 231 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 MS4A6EQ96DS6 147 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 WDR77Q9BQA1 342 aaPredicted RBP17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 RHBGQ9H310 441 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 LANCL2Q9NS86 450 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 PTGFRNQ9P2B2 879 aa17.29■□□□□ 0.36
SYNGR3-204ENST00000564642 EXOC1LA0A1B0GW35 172 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 MAGEB17A8MXT2 336 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 ERI3O43414 337 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 VPS4BO75351 444 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 EPORP19235 508 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 HNRNPH1P31943 449 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 CASP2P42575 452 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 ALDH18A1P54886 795 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 RHAGQ02094 409 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 MFAP5Q13361 173 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 SETDB1Q15047 1291 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 INPP5JQ15735 1006 aaPredicted RBP17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 BTBD16Q32M84 506 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 TRIM40Q6P9F5 258 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 Q6ZS92 163 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 IQCKQ8N0W5 287 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 PLD6Q8N2A8 252 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 SIRT6Q8N6T7 355 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 TEX9Q8N6V9 391 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 DNAJB14Q8TBM8 379 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 UBE2E3Q969T4 207 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 SCYL1Q96KG9 808 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 IMMP1LQ96LU5 166 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 GPR78Q96P69 363 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 REXO4Q9GZR2 422 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 AICDAQ9GZX7 198 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 CPSF2Q9P2I0 782 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 VPS4AQ9UN37 437 aa17.28■□□□□ 0.36
SYNGR3-204ENST00000564642 A0A0G2JN53 185 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 TRIM49D1C9J1S8 452 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 PRMT3O60678 531 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 CELA2AP08217 269 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 ABHD2P08910 425 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 SNRPAP09012 282 aaKnown RBP17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 RBP1P09455 135 aa17.27■□□□□ 0.36
SYNGR3-204ENST00000564642 COL6A2P12110 1019 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms