RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 GSK3BP49841 420 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 TNK1Q13470 666 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 LRRC37A5PQ49AS3 106 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 C9orf66Q5T8R8 295 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 C11orf57Q6ZUT1 292 aaPredicted RBP3.68□□□□□ -1.82
UBR1-205ENST00000564540 COX8CQ7Z4L0 72 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 ABI3BPQ7Z7G0 1075 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 FGFRL1Q8N441 504 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 CCDC185Q8N715 623 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 CSNK1G2-AS1Q8NCQ2 148 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 RAD54LQ92698 747 aa3.68□□□□□ -1.82
UBR1-205ENST00000564540 KLLNB2CW77 178 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 RENP00797 406 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 CD1DP15813 335 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 PSMB4P28070 264 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 RAD23AP54725 363 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 UGCGQ16739 394 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 KNOP1Q1ED39 458 aaKnown RBP3.67□□□□□ -1.82
UBR1-205ENST00000564540 AGAP7PQ5VUJ5 663 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 VITQ6UXI7 678 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 MACC1Q6ZN28 852 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 Q6ZVQ6 151 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 ERN2Q76MJ5 926 aaKnown RBP3.67□□□□□ -1.82
UBR1-205ENST00000564540 MCM10Q7L590 875 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 GPR141Q7Z602 305 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 ADCK2Q7Z695 626 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 IQUBQ8NA54 791 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 CCDC191Q8NCU4 936 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 HEXDCQ8WVB3 486 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 ZNF414Q96IQ9 312 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 LRRCC1Q9C099 1032 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 C5orf66Q9H5L9 145 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 FNDC4Q9H6D8 234 aaPredicted RBP3.67□□□□□ -1.82
UBR1-205ENST00000564540 RPF1Q9H9Y2 349 aaKnown RBP3.67□□□□□ -1.82
UBR1-205ENST00000564540 SNX7Q9UNH6 387 aa3.67□□□□□ -1.82
UBR1-205ENST00000564540 TRGV8A0A0C4DH27 118 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 A0A1W2PNU3 283 aaPredicted RBP3.66□□□□□ -1.82
UBR1-205ENST00000564540 FAM86B1E9PN63 330 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 CCDC188H7C350 402 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 PGRMC2O15173 223 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 FAM86B2P0C5J1 330 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 GOT1P17174 413 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 CTNNA2P26232 953 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 PTENP60484 403 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 ACY1Q03154 408 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 GCKRQ14397 625 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 GRB14Q14449 540 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 LEMD1Q68G75 181 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 Q71RC1 249 aaPredicted RBP3.66□□□□□ -1.82
UBR1-205ENST00000564540 DNAJB7Q7Z6W7 309 aaPredicted RBP3.66□□□□□ -1.82
UBR1-205ENST00000564540 RPAINQ86UA6 219 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 TICAM2Q86XR7 235 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 KLHL30-AS1Q8NEE0 82 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 Q8NFD4 153 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 RHOXF1Q8NHV9 184 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 KIF18AQ8NI77 898 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 OCC1Q8TAD7 63 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 GRK7Q8WTQ7 553 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 ST6GALNAC6Q969X2 333 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 NABP1Q96AH0 204 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 AK8Q96MA6 479 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 HNRNPABQ99729 332 aaKnown RBP3.66□□□□□ -1.82
UBR1-205ENST00000564540 STRADBQ9C0K7 418 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 C10orf88Q9H8K7 445 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 MOB1AQ9H8S9 216 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 WDR41Q9HAD4 459 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 NCKAP1Q9Y2A7 1128 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 TTLL3Q9Y4R7 772 aa3.66□□□□□ -1.82
UBR1-205ENST00000564540 IGHV3-16A0A0C4DH30 117 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 ANXA2P2A6NMY6 339 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 LMO7DNF2Z398 122 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 INPP4BO15327 924 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 FLRT2O43155 660 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 PPIP5K2O43314 1243 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 FCGR3BO75015 233 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 SH3BGRLO75368 114 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 C9P02748 559 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 DUX4L4P0CJ87 422 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 DLATP10515 647 aaKnown RBP3.65□□□□□ -1.83
UBR1-205ENST00000564540 PDGFRAP16234 1089 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 C3AR1Q16581 482 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 C1orf141Q5JVX7 400 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 FAM46CQ5VWP2 391 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 CCDC186Q7Z3E2 898 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 GPD1LQ8N335 351 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 PCDHB18PQ96TA0 734 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 OR10A4Q9H209 315 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 DPEP2Q9H4A9 486 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 KCNK13Q9HB14 408 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 CHCHD3Q9NX63 227 aaKnown RBP3.65□□□□□ -1.83
UBR1-205ENST00000564540 TMOD3Q9NYL9 352 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 ZNF581Q9P0T4 197 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 ZNF346Q9UL40 294 aaKnown RBP3.65□□□□□ -1.83
UBR1-205ENST00000564540 AUP1Q9Y679 476 aa3.65□□□□□ -1.83
UBR1-205ENST00000564540 NPIPA3F8WFD2 350 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 TXNL1O43396 289 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 FDPSP14324 419 aaKnown RBP3.64□□□□□ -1.83
UBR1-205ENST00000564540 PTAFRP25105 342 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 NPY4RP50391 375 aa3.64□□□□□ -1.83
UBR1-205ENST00000564540 RIDAP52758 137 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms