RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 RAB42Q8N4Z0 105 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 MFSD2AQ8NA29 543 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 OR52E1Q8NGJ3 308 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 WDR20Q8TBZ3 569 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 SMPDL3AQ92484 453 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 ZUFSPQ96AP4 578 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 WDR34Q96EX3 536 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 COG8Q96MW5 612 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 ACAT2Q9BWD1 397 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 POMPQ9Y244 141 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 COLEC10Q9Y6Z7 277 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 SERTM1A2A2V5 107 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 MEI4A8MW99 385 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 WNT1P04628 370 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 C1GALT1C1LP0DN25 315 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 CFL1P23528 166 aaKnown RBP16.97■□□□□ 0.31
GDE1-203ENST00000564172 RAB28P51157 221 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 PHC1P78364 1004 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 DMWDQ09019 674 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 ATG9BQ674R7 924 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 SLC36A4Q6YBV0 504 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 LINC00299Q6ZSB3 139 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 FUNDC1Q8IVP5 155 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 GPBAR1Q8TDU6 330 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 CHAC2Q8WUX2 184 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 TANKQ92844 425 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 RTKNQ9BST9 563 aa16.97■□□□□ 0.31
GDE1-203ENST00000564172 ZNF624Q9P2J8 865 aaPredicted RBP16.97■□□□□ 0.31
GDE1-203ENST00000564172 DNAH14Q0VDD8 3507 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 ABCA7Q8IZY2 2146 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 A0A1W2PPV9 198 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 A0A1W2PR77 199 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 F3P13726 295 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 SLC2A4P14672 509 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 BCKDHBP21953 392 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 TGM1P22735 817 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 CD38P28907 300 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 MRPL19P49406 292 aaKnown RBP16.96■□□□□ 0.31
GDE1-203ENST00000564172 NME5P56597 212 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 RACK1P63244 317 aaKnown RBP16.96■□□□□ 0.31
GDE1-203ENST00000564172 ZNF33BQ06732 778 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 SIGLEC14Q08ET2 396 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 GRIK2Q13002 908 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 ZNF846Q147U1 533 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 NXPE4Q6UWF7 544 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 PARGQ86W56 976 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 SH3KBP1Q96B97 665 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 HSPA12BQ96MM6 686 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 NECAB3Q96P71 396 aaPredicted RBP16.96■□□□□ 0.31
GDE1-203ENST00000564172 BRINP2Q9C0B6 783 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 XKR8Q9H6D3 395 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 LRTM1Q9HBL6 345 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 TAC3Q9UHF0 121 aa16.96■□□□□ 0.31
GDE1-203ENST00000564172 JRKO75564 520 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 PRKACAP17612 351 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 YBX1P67809 324 aaKnown RBP16.96■□□□□ 0.3
GDE1-203ENST00000564172 SLC25A3Q00325 362 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 SMU1Q2TAY7 513 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 C6orf52Q5T4I8 152 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 LAYNQ6UX15 382 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 AKAP14Q86UN6 197 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 RNF175Q8N4F7 328 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 OR7G3Q8NG95 312 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 RMND5BQ96G75 393 aaPredicted RBP16.96■□□□□ 0.3
GDE1-203ENST00000564172 EFCAB11Q9BUY7 163 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 RAB11FIP5Q9BXF6 653 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 PCBD2Q9H0N5 130 aa16.96■□□□□ 0.3
GDE1-203ENST00000564172 TRBV23OR9-2A0A075B6M9 112 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 SEC22BO75396 215 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 NDUFS1P28331 727 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 SLC19A1P41440 591 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 BLKP51451 505 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 RPL38P63173 70 aaKnown RBP16.95■□□□□ 0.3
GDE1-203ENST00000564172 COX10Q12887 443 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 SLBPQ14493 270 aaKnown RBP eCLIP16.95■□□□□ 0.3
GDE1-203ENST00000564172 MAPRE2Q15555 327 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 ATAD3BQ5T9A4 648 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 CCBE1Q6UXH8 406 aaPredicted RBP16.95■□□□□ 0.3
GDE1-203ENST00000564172 GLRX5Q86SX6 157 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 OR2L8Q8NGY9 312 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 MTERF1Q99551 399 aaKnown RBP16.95■□□□□ 0.3
GDE1-203ENST00000564172 GSDMCQ9BYG8 508 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 KIR3DX1Q9H7L2 352 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 C1orf109Q9NX04 203 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 CACNA1IQ9P0X4 2223 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 ICKQ9UPZ9 632 aa16.95■□□□□ 0.3
GDE1-203ENST00000564172 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 AIM2O14862 343 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 SNRPB2P08579 225 aaKnown RBP16.94■□□□□ 0.3
GDE1-203ENST00000564172 CDH1P12830 882 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 BNIP3Q12983 259 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 KIAA0040Q15053 153 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 PAGE2BQ5JRK9 111 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 MED27Q6P2C8 311 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 TSSK4Q6SA08 328 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 IQCHQ86VS3 1027 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 C17orf64Q86WR6 236 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 ZFAND4Q86XD8 727 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 TMEFF1Q8IYR6 380 aa16.94■□□□□ 0.3
GDE1-203ENST00000564172 PHACTR4Q8IZ21 702 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms