RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 MAGIXQ9H6Y5 334 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 LTB4R2Q9NPC1 389 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 ACOT13Q9NPJ3 140 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 CRNNQ9UBG3 495 aaPredicted RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 AASSQ9UDR5 926 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 DLGAP4Q9Y2H0 992 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 PCDHGA3Q9Y5H0 932 aa10.08□□□□□ -0.8
RNF40-204ENST00000563683 URB1O60287 2271 aaKnown RBP10.08□□□□□ -0.8
RNF40-204ENST00000563683 ABHD14A-ACY1A0A1B0GW23 586 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 METTL15A6NJ78 407 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 A6NL46 340 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 SNX4O95219 450 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 MT-ND2P03891 347 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 MYL12AP19105 171 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 CST5P28325 142 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 MAT2AP31153 395 aaKnown RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 HOXD11P31277 338 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 CCR7P32248 378 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 KDELR2P33947 212 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TM4SF4P48230 202 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 NTHL1P78549 312 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 HTRA3P83110 453 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 RAPSNQ13702 412 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 RAB33AQ14088 237 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 KEAP1Q14145 624 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TEAD4Q15561 434 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 FAM209AQ5JX71 171 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 C9orf64Q5T6V5 341 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 B3GNT8Q7Z7M8 397 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 PAWRQ96IZ0 340 aaKnown RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 IL4I1Q96RQ9 567 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 FNDC11Q9BVV2 318 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 GPRC5BQ9NZH0 403 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 RHCGQ9UBD6 479 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 LHX3Q9UBR4 397 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 ZNF282Q9UDV7 671 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 GRIP1Q9Y3R0 1128 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 LYVE1Q9Y5Y7 322 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 CARNS1A5YM72 827 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 SNTNA6NMZ2 147 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 LOC110117498-PIK3R3F6TDL0 507 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 PI15O43692 258 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 SERPINI2O75830 405 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 GADD45GO95257 159 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 WISP3O95389 354 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 CLTBP09497 229 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 CLDN8P56748 225 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 CSNK2BP67870 215 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 CDK10Q15131 360 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 AFMIDQ63HM1 303 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 NEK5Q6P3R8 708 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 PSRC1Q6PGN9 363 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 OR10G2Q8NGC3 310 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 WDR36Q8NI36 951 aaKnown RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 PXYLP1Q8TE99 480 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 PIH1D2Q8WWB5 315 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 PIK3R3Q92569 461 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 MAL2Q969L2 176 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 BTBD2Q9BX70 525 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 ALOXE3Q9BYJ1 711 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 RETREG1Q9H6L5 497 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 VMACQ2NL98 169 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 ATG9BQ674R7 924 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 CXorf57Q6NSI4 855 aaKnown RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 DLEU7Q6UYE1 221 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 OR52E4Q8NGH9 312 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 MTERF3Q96E29 417 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 YIPF4Q9BSR8 244 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 SLA2Q9H6Q3 261 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 ZNF334Q9HCZ1 680 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 C11orf16Q9NQ32 467 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3DA0A087WVF3 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3IA0A087WXS9 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3EA0A087X179 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3KA0A087X1G2 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3FA6NER0 549 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3LB9A6J9 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 C6orf47O95873 294 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 SLC16A8O95907 504 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TSPAN19P0C672 248 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3HP0C7X1 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 FPR1P21462 350 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 ZFP36L2P47974 494 aaKnown RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 CLCN7P51798 805 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 DEFB103AP81534 67 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 SCARB2Q14108 478 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TIMM50Q3ZCQ8 353 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 XKR7Q5GH72 579 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 ATAD3CQ5T2N8 411 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3GQ6DHY5 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3CQ6IPX1 549 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 CD300LGQ6UXG3 332 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 AMZ2Q86W34 360 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 NPAS3Q8IXF0 933 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 TBC1D3Q8IZP1 549 aaPredicted RBP10.07□□□□□ -0.8
RNF40-204ENST00000563683 LGI4Q8N135 537 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 LMNTD1Q8N9Z9 388 aa10.07□□□□□ -0.8
RNF40-204ENST00000563683 FIBINQ8TAL6 211 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms