RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GMEB1Q9Y692 573 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 MTCH2Q9Y6C9 303 aa18.27■□□□□ 0.52
SMPD3-203ENST00000563226 NOBOXO60393 691 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 EML2O95834 649 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 DRD1P21728 446 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 CXCR2P25025 360 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 KRT33BQ14525 404 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 RPE65Q16518 533 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 UAP1L1Q3KQV9 507 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 NADK2Q4G0N4 442 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 SPESP1Q6UW49 350 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 ZDHHC21Q8IVQ6 265 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 TSPAN14Q8NG11 270 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 SLC6A16Q9GZN6 736 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 ABCG4Q9H172 646 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 CD207Q9UJ71 328 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 U3KQV3 271 aa18.27■□□□□ 0.51
SMPD3-203ENST00000563226 MYO10Q9HD67 2058 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 AXIN1O15169 862 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 STATHP02808 62 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 SEMG1P04279 462 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 ETFAP13804 333 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 HOXB3P14651 431 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 DCTP40126 519 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 CDH15P55291 814 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PRDX1Q06830 199 aaKnown RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 ANGPTL8Q6UXH0 198 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 USP30Q70CQ3 517 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 USP51Q70EK9 711 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 ZNF786Q8N393 782 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 RAB42Q8N4Z0 105 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 OR2L8Q8NGY9 312 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 OR5AK3PQ8NH89 298 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 SLC35A5Q9BS91 424 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 AICDAQ9GZX7 198 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 CD320Q9NPF0 282 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PNMA8BQ9ULN7 279 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PADI4Q9UM07 663 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 SCML1Q9UN30 329 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 NCKAP1Q9Y2A7 1128 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PPM1DO15297 605 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 SEMA3DO95025 777 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 THRBP10828 461 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 ACADMP11310 421 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PRKACGP22612 351 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PPIBP23284 216 aaKnown RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 AK4P27144 223 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 AQP1P29972 269 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PEBP1P30086 187 aaKnown RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 RPL3P39023 403 aaKnown RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 MRPS21P82921 87 aaKnown RBP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 ENPP7Q6UWV6 458 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 IKBIPQ70UQ0 350 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 UBE3DQ7Z6J8 389 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.26■□□□□ 0.51
SMPD3-203ENST00000563226 ADHFE1Q8IWW8 467 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 AMER3Q8N944 861 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 HSH2DQ96JZ2 352 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 OR2M4Q96R27 311 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 LTB4R2Q9NPC1 389 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 AHSPQ9NZD4 102 aa18.26■□□□□ 0.51
SMPD3-203ENST00000563226 A0A0G2JN53 185 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 SHISA7A6NL88 538 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 hCG_2039718K7EN88 272 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 GCM2O75603 506 aaPredicted RBP18.25■□□□□ 0.51
SMPD3-203ENST00000563226 DIRAS1O95057 198 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 ALBP02768 609 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 CRATP43155 626 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 MAPK12P53778 367 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 PPP2R2BQ00005 443 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 CTBSQ01459 385 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 LRRC74AQ0VAA2 488 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 VEZF1Q14119 521 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 PLCL1Q15111 1095 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 CNPY1Q3B7I2 92 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMPD3-203ENST00000563226 CBLL1Q75N03 491 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 SLC44A3Q8N4M1 653 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 CCL4L1Q8NHW4 92 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 TM4SF18Q96CE8 201 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 MTERF3Q96E29 417 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 OSBPL10Q9BXB5 764 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 NT5DC2Q9H857 520 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 KCNK12Q9HB15 430 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 SLC6A20Q9NP91 592 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 MIEF1Q9NQG6 463 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 SPHK1Q9NYA1 384 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 TBC1D29Q9UFV1 150 aa18.25■□□□□ 0.51
SMPD3-203ENST00000563226 GOLGA4Q13439 2230 aaKnown RBP18.25■□□□□ 0.51
SMPD3-203ENST00000563226 A0A1W2PRB8 838 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 NDUFS4O43181 175 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TMPRSS11DO60235 418 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 CD72P21854 359 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 KIAA1024LP59773 190 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 VLDLRP98155 873 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 TTC33Q6PID6 262 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 EIF3MQ7L2H7 374 aaKnown RBP18.24■□□□□ 0.51
SMPD3-203ENST00000563226 RD3Q7Z3Z2 195 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 SVOPLQ8N434 492 aa18.24■□□□□ 0.51
SMPD3-203ENST00000563226 FBXL6Q8N531 539 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms