RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 I3L1I5 382 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 OR7A17O14581 309 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 DLX3O60479 287 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 GALR3O60755 368 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 SMIM24O75264 130 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 KRT4P19013 534 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 EEF1DP29692 281 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 HNF4AP41235 474 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 CCT5P48643 541 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PIK3CGP48736 1102 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 FOXL2P58012 376 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF844Q08AG5 666 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 GTF2H2Q13888 395 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 SSPNQ14714 243 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 RBBP5Q15291 538 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 LINC00303Q3SY05 128 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 TNFAIP8L3Q5GJ75 292 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PAGE2BQ5JRK9 111 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 RNFT1Q5M7Z0 435 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 LIPJQ5W064 366 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ADNP2Q6IQ32 1131 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 GRHL2Q6ISB3 625 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 GTF2H2CQ6P1K8 395 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PRSS41Q7RTY9 318 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 GOLGA7Q7Z5G4 137 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 SHISA5Q8N114 240 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 TEX9Q8N6V9 391 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 L3MBTL4Q8NA19 623 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 OR9A4Q8NGU2 314 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 UTP15Q8TED0 518 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF473Q8WTR7 871 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 THAP4Q8WY91 577 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 MMABQ96EY8 250 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 WBP1Q96G27 269 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 NTMT1Q9BV86 223 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 TGIF2Q9GZN2 237 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PIF1Q9H611 641 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 IPPKQ9H8X2 491 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 RRAGDQ9NQL2 400 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF282Q9UDV7 671 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 NXT1Q9UKK6 140 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PLAAQ9Y263 795 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PCSK5Q92824 1860 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 C4orf51C9J302 202 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 H0YIV9 168 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ATXN7O15265 892 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PRPF4O43172 522 aaKnown RBP eCLIP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PLIN3O60664 434 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PROCP04070 461 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ZGLP1P0C6A0 271 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PRKAR1AP10644 381 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ALOX12P18054 663 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 IL1RNP18510 177 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ATP5F1P24539 256 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 AVPR1BP47901 424 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PRKAA2P54646 552 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 HERVK_113P63132 956 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 RGS1Q08116 209 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 IFFO1Q0D2I5 559 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 TRAF3Q13114 568 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 UBAP2LQ14157 1087 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 HERC3Q15034 1050 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 TBR1Q16650 682 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 VWA2Q5GFL6 755 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 BEND6Q5SZJ8 279 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 MED25Q71SY5 747 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 BANPQ8N9N5 519 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 LSM14AQ8ND56 463 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 OR7G3Q8NG95 312 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 OR52B6Q8NGF0 335 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 STT3BQ8TCJ2 826 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF483Q8TF39 744 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 UBE2E3Q969T4 207 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 COL26A1Q96A83 441 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 MS4A6EQ96DS6 147 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 L3HYPDHQ96EM0 354 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 NSUN5Q96P11 429 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ERVK-6Q9BXR3 956 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 KLHL31Q9H511 634 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 NOL11Q9H8H0 719 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 CLK4Q9HAZ1 481 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ANKHQ9HCJ1 492 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 MKKSQ9NPJ1 570 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 GPN3Q9UHW5 284 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ZNF225Q9UK10 706 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 GRID1Q9ULK0 1009 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 POLHQ9Y253 713 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 PTRH2Q9Y3E5 179 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 KCNMB2Q9Y691 235 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 SMG1Q96Q15 3661 aaKnown RBP5.86□□□□□ -1.47
CNOT1-204ENST00000563130 ZFYVE26Q68DK2 2539 aa5.86□□□□□ -1.47
CNOT1-204ENST00000563130 BSNQ9UPA5 3926 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ATMQ13315 3056 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 A0A1B0GTL3 188 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 A0A1W2PQ72 361 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 URADA6NGE7 173 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 ANKDD1BA6NHY2 528 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 SGK494L7N484 410 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 PPP6CO00743 305 aa5.85□□□□□ -1.47
CNOT1-204ENST00000563130 CTIFO43310 598 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms