RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CKAP2Q8WWK9 683 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 DNASE1L2Q92874 299 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 PDLIM5Q96HC4 596 aaKnown RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 PI4K2AQ9BTU6 479 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 PUS3Q9BZE2 481 aaKnown RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 STRADBQ9C0K7 418 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 DPEP2Q9H4A9 486 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 JPT2Q9H910 190 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 LMAN1LQ9HAT1 526 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 DBF4Q9UBU7 674 aaPredicted RBP2.39□□□□□ -2.03
CHD9-207ENST00000562806 POMT2Q9UKY4 750 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 RARRES3Q9UL19 164 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 ZNF510Q9Y2H8 683 aa2.39□□□□□ -2.03
CHD9-207ENST00000562806 E5RGE8 158 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 PDHXO00330 501 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 PSMA7O14818 248 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 SLC30A4O14863 429 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 PGRMC2O15173 223 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 MAGEB2O15479 319 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 CLN5O75503 358 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 FGF19O95750 216 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 MT-ND2P03891 347 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 HOXD4P09016 255 aaPredicted RBP2.38□□□□□ -2.03
CHD9-207ENST00000562806 FAM58BPP0C7Q3 252 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 SP9P0CG40 484 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 ADORA3P0DMS8 318 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 GATA2P23769 480 aaPredicted RBP2.38□□□□□ -2.03
CHD9-207ENST00000562806 DUTP33316 252 aaKnown RBP2.38□□□□□ -2.03
CHD9-207ENST00000562806 PEX6Q13608 980 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 C15orf32Q32M92 178 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 ZNF542PQ5EBM4 170 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 SPANXN4Q5MJ08 99 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 FAM46CQ5VWP2 391 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 KLHL10Q6JEL2 608 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 ZNF774Q6NX45 483 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 SLC27A4Q6P1M0 643 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 BTNL8Q6UX41 500 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 ZNF841Q6ZN19 808 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 Q6ZR54 194 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 Q6ZVQ6 151 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 SH2D6Q7Z4S9 175 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 SLC47A2Q86VL8 602 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 CROCCP3Q8IVE0 287 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 ELMOD1Q8N336 334 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 BEST4Q8NFU0 473 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 C11orf45Q8TAV5 145 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 UBLCP1Q8WVY7 318 aaPredicted RBP2.38□□□□□ -2.03
CHD9-207ENST00000562806 RIT1Q92963 219 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 C11orf52Q96A22 123 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 CITED2Q99967 270 aaPredicted RBP2.38□□□□□ -2.03
CHD9-207ENST00000562806 C17orf62Q9BQA9 187 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 CENPOQ9BU64 300 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 OCR1Q9BZK8 76 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 MOB1AQ9H8S9 216 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 RPS10P5Q9NQ39 176 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 UBQLN2Q9UHD9 624 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 LEF1Q9UJU2 399 aaPredicted RBP2.38□□□□□ -2.03
CHD9-207ENST00000562806 ITGA11Q9UKX5 1188 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.38□□□□□ -2.03
CHD9-207ENST00000562806 NCKAP1Q9Y2A7 1128 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 NSG2Q9Y328 171 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 KLK4Q9Y5K2 254 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 AUP1Q9Y679 476 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 PFASO15067 1338 aa2.38□□□□□ -2.03
CHD9-207ENST00000562806 HEG1Q9ULI3 1381 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 SPATA31D1Q6ZQQ2 1576 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 OOEPA6NGQ2 149 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 YDJCA8MPS7 323 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 KBTBD13C9JR72 458 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 PRSS46E5RG02 174 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 G3V2L1 256 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 BCL2L11O43521 198 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 SRSF10O75494 262 aaKnown RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 HPP00738 406 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 RLN1P04808 185 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 ZFYP08048 801 aaPredicted RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 IL4RP24394 825 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 CRKLP46109 303 aaKnown RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 CSRP3P50461 194 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 MLF2Q15773 248 aaPredicted RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 RFTN2Q52LD8 501 aaPredicted RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 PIGWQ7Z7B1 504 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 SLC25A42Q86VD7 318 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 OR4N5Q8IXE1 308 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 DND1Q8IYX4 353 aaKnown RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 C4orf32Q8N8J7 132 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 RNF149Q8NC42 400 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 CSNK1G2-AS1Q8NCQ2 148 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 ZNF597Q96LX8 424 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 NEDD4LQ96PU5 975 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 PINK1Q9BXM7 581 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 MINDY3Q9H8M7 445 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 GNB4Q9HAV0 340 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 KCNK13Q9HB14 408 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 C3orf14Q9HBI5 128 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 PHPT1Q9NRX4 125 aaPredicted RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 GPR173Q9NS66 373 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 SLCO1C1Q9NYB5 712 aa2.37□□□□□ -2.03
CHD9-207ENST00000562806 THAP10Q9P2Z0 257 aaPredicted RBP2.37□□□□□ -2.03
CHD9-207ENST00000562806 GIMAP2Q9UG22 337 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms