RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PHF10Q8WUB8 498 aaKnown RBP12.16□□□□□ -0.46
SF3B3-202ENST00000562722 OR4K3Q96R72 315 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 VKORC1Q9BQB6 163 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 PRDM9Q9NQV7 894 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 SLC17A6Q9P2U8 582 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 ASIC3Q9UHC3 531 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 KLF13Q9Y2Y9 288 aaPredicted RBP12.16□□□□□ -0.46
SF3B3-202ENST00000562722 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
SF3B3-202ENST00000562722 TRBV11-1A0A0K0K1C0 115 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 A0A1B0GTH9 108 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 KLRC4-KLRK1H3BQV0 150 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 CDK2AP1O14519 115 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 NRDCO43847 1150 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 BANF1O75531 89 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 AHSGP02765 367 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 GABRB3P28472 473 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 PTGS2P35354 604 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 SCTRP47872 440 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 PGGT1BP53609 377 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 TLE4Q04727 773 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 RNFT1Q5M7Z0 435 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 HECTD2Q5U5R9 776 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 MEX3BQ6ZN04 569 aaKnown RBP12.15□□□□□ -0.46
SF3B3-202ENST00000562722 KIAA0408Q6ZU52 694 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 STRA8Q7Z7C7 330 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 TMPRSS11BQ86T26 416 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 CDH24Q86UP0 819 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 CD163Q86VB7 1156 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 RASGEF1CQ8N431 466 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 TMEM156Q8N614 296 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 POGLUT1Q8NBL1 392 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 TRPV3Q8NET8 790 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 NEIL2Q969S2 332 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 FBXL8Q96CD0 374 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 SPOCK3Q9BQ16 436 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 AIF1LQ9BQI0 150 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 SARGQ9BW04 601 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 SPNS1Q9H2V7 528 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 FBXW2Q9UKT8 454 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 NEU2Q9Y3R4 380 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 ASB1Q9Y576 335 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 FBN2P35556 2912 aa12.15□□□□□ -0.46
SF3B3-202ENST00000562722 TCRBV16S1A1N1A0A5B0 115 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 PEX1O43933 1283 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 MYO1DO94832 1006 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 ENO2P09104 434 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-202ENST00000562722 SAT1P21673 171 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 TRHRP34981 398 aaPredicted RBP12.14□□□□□ -0.47
SF3B3-202ENST00000562722 AHRP35869 848 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 CLCN2P51788 898 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 KRTAP10-9P60411 292 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 REEP5Q00765 189 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 CYP1B1Q16678 543 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 BBS9Q3SYG4 887 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 TOR1AIP1Q5JTV8 583 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 RNASEH2BQ5TBB1 312 aaKnown RBP12.14□□□□□ -0.47
SF3B3-202ENST00000562722 CEP128Q6ZU80 1094 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 FGD2Q7Z6J4 655 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 THOC6Q86W42 341 aaKnown RBP12.14□□□□□ -0.47
SF3B3-202ENST00000562722 SULF2Q8IWU5 870 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 CYP4Z2PQ8N1L4 340 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 C14orf79Q96F83 325 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 CERS2Q96G23 380 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 FAR2Q96K12 515 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 EGFL8Q99944 293 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 NAT9Q9BTE0 207 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 KLHL31Q9H511 634 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 PELI2Q9HAT8 420 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 CLK4Q9HAZ1 481 aaKnown RBP12.14□□□□□ -0.47
SF3B3-202ENST00000562722 NECTIN3Q9NQS3 549 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 PNO1Q9NRX1 252 aaKnown RBP12.14□□□□□ -0.47
SF3B3-202ENST00000562722 ZFATQ9P243 1243 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 PPP2R2CQ9Y2T4 447 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 JRKLQ9Y4A0 524 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
SF3B3-202ENST00000562722 USP27XA6NNY8 438 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 ADAM10O14672 748 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 FANCGO15287 622 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 HS6ST1O60243 411 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 ITGA10O75578 1167 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 PDE9AO76083 593 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 CAPN3P20807 821 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 FNTAP49354 379 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 GPR85P60893 370 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 BTN3A2P78410 334 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 HP1BP3Q5SSJ5 553 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-202ENST00000562722 FAM45BPQ6NSW5 357 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 ZNF227Q86WZ6 799 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 LRRC8AQ8IWT6 810 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 CNTN4Q8IWV2 1026 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 CHERPQ8IWX8 916 aaKnown RBP12.13□□□□□ -0.47
SF3B3-202ENST00000562722 CA13Q8N1Q1 262 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 ANKRD53Q8N9V6 530 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 NFAM1Q8NET5 270 aaPredicted RBP12.13□□□□□ -0.47
SF3B3-202ENST00000562722 B3GNT7Q8NFL0 401 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 FAM45AQ8TCE6 357 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 CCT6BQ92526 530 aa12.13□□□□□ -0.47
SF3B3-202ENST00000562722 PDLIM2Q96JY6 352 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms