RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 REEP4Q9H6H4 257 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 AP3M1Q9Y2T2 418 aa13.62□□□□□ -0.23
COMMD4-205ENST00000562310 ADAMTS9Q9P2N4 1935 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 A0A096LPI6 279 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 A0A0A6YYD5 115 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TRIM38O00635 465 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TXNDC9O14530 226 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ARHGAP33O14559 1287 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ZSCAN9O15535 394 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ERI3O43414 337 aaKnown RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TBX19O60806 448 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 DNAJA2O60884 412 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 CTSVO60911 334 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ERN1O75460 977 aaKnown RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 RASSF9O75901 435 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 SCELO95171 688 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 PNLIPP16233 465 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ZNF10P21506 573 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 LSSP48449 732 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 PPM1FP49593 454 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TAS2R50P59544 299 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 KLC1Q07866 573 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 HYAL2Q12891 473 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 NR0B2Q15466 257 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 PGS1Q32NB8 556 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TRIM61Q5EBN2 209 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 PIGGQ5H8A4 983 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 PAGE3Q5JUK9 113 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 CPTPQ5TA50 214 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 FBXO42Q6P3S6 717 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 CYB5D1Q6P9G0 228 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ABHD17CQ6PCB6 329 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 SLC2A7Q6PXP3 512 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 UBE3DQ7Z6J8 389 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ZCCHC7Q8N3Z6 543 aaKnown RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 NATD1Q8N6N6 113 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 FAM181AQ8N9Y4 354 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 VPS37AQ8NEZ2 397 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 COQ8BQ96D53 544 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TCTN2Q96GX1 697 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 AHCYL2Q96HN2 611 aaKnown RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TRAPPC9Q96Q05 1148 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 C17orf62Q9BQA9 187 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 BHLHE41Q9C0J9 482 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 KCNH6Q9H252 994 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 GAREM1Q9H706 876 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 COPS7BQ9H9Q2 264 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 LHX9Q9NQ69 397 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 LYARQ9NX58 379 aaKnown RBP13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ADA2Q9NZK5 511 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 TMEM181Q9P2C4 612 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 ABCD2Q9UBJ2 740 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 SLC7A8Q9UHI5 535 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 BCAP29Q9UHQ4 241 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 RAB23Q9ULC3 237 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 PADI4Q9UM07 663 aa13.61□□□□□ -0.23
COMMD4-205ENST00000562310 IGHV1OR21-1A0A087WYE8 117 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 A0A0J9YVX5 310 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 MAP3K7O43318 606 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 FURINP09958 794 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 PVRP15151 417 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 ST6GAL1P15907 406 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 HIST1H1TP22492 207 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 ME2P23368 584 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 TRPC1P48995 793 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 SLC7A2P52569 658 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 PLA2G16P53816 162 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 PPP1CAP62136 330 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 C2orf80Q0P641 193 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 RIPK1Q13546 671 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 HEPACAMQ14CZ8 416 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 SUZ12Q15022 739 aaKnown RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 C6orf10Q5SRN2 563 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 CROCCQ5TZA2 2017 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 ZC3H14Q6PJT7 736 aaKnown RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 ABHD13Q7L211 337 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 PLXDC1Q8IUK5 500 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 OR7A2PQ8NGA2 310 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 OR8J3Q8NGG0 315 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 GTF2H4Q92759 462 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 NAT6Q93015 286 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 GFM2Q969S9 779 aaKnown RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 PPCDCQ96CD2 204 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 CLPTM1LQ96KA5 538 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 CGREF1Q99674 301 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 SH3GL1Q99961 368 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 CCDC3Q9BQI4 270 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 DUSP26Q9BV47 211 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 FAIM2Q9BWQ8 316 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 SORBS1Q9BX66 1292 aaKnown RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 IL1RL2Q9HB29 575 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 MIEF1Q9NQG6 463 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 DNAAF2Q9NVR5 837 aaKnown RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
COMMD4-205ENST00000562310 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
COMMD4-205ENST00000562310 H0YGG7 62 aa13.59□□□□□ -0.23
COMMD4-205ENST00000562310 RTCAO00442 366 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms