RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ASCL5Q7RTU5 278 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 ARHGAP22Q7Z5H3 698 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 SPATA19Q7Z5L4 167 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 TMCO2Q7Z6W1 182 aaPredicted RBP3.44□□□□□ -1.86
HERC1-215ENST00000561436 DSG4Q86SJ6 1040 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 TMPRSS11BQ86T26 416 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 PLD3Q8IV08 490 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 KLHL7Q8IXQ5 586 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 GPR65Q8IYL9 337 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 NDUFAF2Q8N183 169 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 MRPL43Q8N983 215 aaKnown RBP3.44□□□□□ -1.86
HERC1-215ENST00000561436 OR2T12Q8NG77 320 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 IRGQQ8WZA9 623 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 ST6GAL2Q96JF0 529 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 RPGRIP1Q96KN7 1286 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 URM1Q9BTM9 101 aaKnown RBP3.44□□□□□ -1.86
HERC1-215ENST00000561436 GLT8D2Q9H1C3 349 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 MFSD1Q9H3U5 465 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 RGS18Q9NS28 235 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 TMEM161AQ9NX61 479 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 TAAR2Q9P1P5 351 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 ZFP37Q9Y6Q3 630 aaPredicted RBP3.44□□□□□ -1.86
HERC1-215ENST00000561436 MYH3P11055 1940 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 PLXNB2O15031 1838 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 A0A0G2JMZ2 1700 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 IGSF9BQ9UPX0 1349 aa3.44□□□□□ -1.86
HERC1-215ENST00000561436 DOCK2Q92608 1830 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 ANKRD61A6NGH8 418 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 PRSS44E7EML9 344 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 PLOD2O00469 737 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 IFIT3O14879 490 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 PRKNO60260 465 aaPredicted RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 NMT2O60551 498 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 KRT36O76013 467 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 PGLSO95336 258 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 SIX3O95343 332 aaPredicted RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 CRYAAP02489 173 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 GBAP04062 536 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 F7P08709 466 aaPredicted RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 PLA2G4BP0C869 781 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 ZNF286BP0CG31 522 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 GHRP10912 638 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 HAPLN1P10915 354 aaPredicted RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 EPCAMP16422 314 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 MSH3P20585 1137 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 PRKCIP41743 596 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 CRYBB1P53674 252 aaPredicted RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 NAGLUP54802 743 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 VCPP55072 806 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 CDH11P55287 796 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 SNAP25P60880 206 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 POLR2LP62875 67 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 MRPS6P82932 125 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 RPL36AP83881 106 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 SMC1AQ14683 1233 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 FAM174BQ3ZCQ3 159 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 SUSD1Q6UWL2 747 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 C9orf139Q6ZV77 190 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 NUP54Q7Z3B4 507 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 SIX6OS1Q8N1H7 587 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 DNAJC22Q8N4W6 341 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 RFLNBQ8N5W9 214 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 TMEM105Q8N8V8 129 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 VN1R2Q8NFZ6 395 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 OR1J1Q8NGS3 322 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 OR13J1Q8NGT2 312 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 SPATA20Q8TB22 786 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 GDAP1Q8TB36 358 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 KCNE4Q8WWG9 221 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 ZNF354BQ96LW1 612 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 UBAC1Q9BSL1 405 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 KATNB1Q9BVA0 655 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 MRPL9Q9BYD2 267 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 MTMR12Q9C0I1 747 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 TMEM117Q9H0C3 514 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 FZD8Q9H461 694 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 TFB2MQ9H5Q4 396 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 AZI2Q9H6S1 392 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 COPS7BQ9H9Q2 264 aaPredicted RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 DDX43Q9NXZ2 648 aaKnown RBP3.43□□□□□ -1.86
HERC1-215ENST00000561436 SPG21Q9NZD8 308 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 RNF150Q9ULK6 438 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 DUSP12Q9UNI6 340 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 TNNQ9UQP3 1299 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 NFASCO94856 1347 aa3.43□□□□□ -1.86
HERC1-215ENST00000561436 PHIPQ8WWQ0 1821 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 COL1A2P08123 1366 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 A0A1W2PPW3 197 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 FEZF1A0PJY2 475 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 EME2A4GXA9 379 aaPredicted RBP3.42□□□□□ -1.86
HERC1-215ENST00000561436 FAM172BPA6NC97 362 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 C5orf60A6NFR6 353 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 MAGEB2O15479 319 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 LINC01565O15544 149 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 LRP3O75074 770 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 PIGNO95427 931 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 C9P02748 559 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 PRSS1P07477 247 aa3.42□□□□□ -1.86
HERC1-215ENST00000561436 EPORP19235 508 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms