RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 LRIT2A6NDA9 550 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 OR2W5A6NFC9 320 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 A8MT66 165 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 STX16-NPEPL1H3BU86 382 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 STX16O14662 325 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 PDGFAP04085 211 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 PLA2G16P53816 162 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 EEF1A2Q05639 463 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 DDX39BQ13838 428 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 TCTN3Q6NUS6 607 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 TDRPQ86YL5 185 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 CYP4X1Q8N118 509 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 CNPY4Q8N129 248 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 TMEM151AQ8N4L1 468 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 MS4A6EQ96DS6 147 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 VPS50Q96JG6 964 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 FAR2Q96K12 515 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 NSUN5Q96P11 429 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 PARD6BQ9BYG5 372 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 NOL11Q9H8H0 719 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 ATP13A2Q9NQ11 1180 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 G3BP2Q9UN86 482 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 COL6A6A6NMZ7 2263 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 TLDC2A0PJX2 215 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 CHST10O43529 356 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 CDH16O75309 829 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 SH3BGRLO75368 114 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 TBX6O95947 436 aaPredicted RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 SMIM10L1P0DMW3 83 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 PGDP52209 483 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 PCDH1Q08174 1060 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 METTL2BQ6P1Q9 378 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 ASB18Q6ZVZ8 466 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 LCA5Q86VQ0 697 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 OR7G3Q8NG95 312 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 ATP6V1E2Q96A05 226 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 SMIM10Q96HG1 83 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 CDK15Q96Q40 435 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 NUDT9Q9BW91 350 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 ZNF160Q9HCG1 818 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 GPR83Q9NYM4 423 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 PCTPQ9UKL6 214 aa18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 PCDHGA9Q9Y5G4 932 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-210ENST00000561277 CEACAM4O75871 244 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 C8orf89P0DMQ9 161 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 TAC1P20366 129 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 ITGA3P26006 1051 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 HPDP32754 393 aaPredicted RBP18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 DEKP35659 375 aaKnown RBP18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 TRIM40Q6P9F5 258 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 RPS27LQ71UM5 84 aaKnown RBP18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 LAS2Q8IYD9 372 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 GALNT16Q8N428 558 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 RNF175Q8N4F7 328 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 OR52B6Q8NGF0 335 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 ZNF473Q8WTR7 871 aaKnown RBP18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 METTL21AQ8WXB1 218 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 CAVIN3Q969G5 261 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 F2RL3Q96RI0 385 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 SPTA1P02549 2419 aa18.8■□□□□ 0.6
TSPAN3-210ENST00000561277 TNRC6AQ8NDV7 1962 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 NSG1A0A0A6YYJ2 146 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 B8ZZF3 427 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 OR7A17O14581 309 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 TGFB1P01137 390 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 NUDT17P0C025 328 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 CCNG1P51959 295 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 IFFO1Q0D2I5 559 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 AIMP2Q13155 320 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 CPSF6Q16630 551 aaKnown RBP eCLIP18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 ADPRMQ3LIE5 342 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 LIPJQ5W064 366 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 LANCL3Q6ZV70 420 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 PARP9Q8IXQ6 854 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 OR2L5Q8NG80 312 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 TBC1D20Q96BZ9 403 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 OR1F2PQ96R84 312 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 MS4A8Q9BY19 250 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 COPS7BQ9H9Q2 264 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 ZBTB26Q9HCK0 441 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 SEMA4BQ9NPR2 832 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 RNF11Q9Y3C5 154 aa18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 HEMK1Q9Y5R4 338 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-210ENST00000561277 A0A088AWK7 358 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 PSMD12O00232 456 aaPredicted RBP18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 CLDN9O95484 217 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 HPP00738 406 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 FHP07954 510 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 GSTA1P08263 222 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 RPS17P08708 135 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 COX6A1P12074 109 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 ZNF10P21506 573 aaPredicted RBP18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 IL10P22301 178 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 RASA2Q15283 850 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 COLEC12Q5KU26 742 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 PRICKLE2Q7Z3G6 844 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 HUS1BQ8NHY5 278 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 MTERF1Q99551 399 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 MLXIPLQ9NP71 852 aa18.78■□□□□ 0.6
TSPAN3-210ENST00000561277 LANCL2Q9NS86 450 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms