RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 COMMD10Q9Y6G5 202 aa17.29■□□□□ 0.36
TPM1-226ENST00000560959 SCN3AQ9NY46 2000 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 PROM1O43490 865 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 B4GALT2O60909 372 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 ITGA10O75578 1167 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 FTCDO95954 541 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 ZSCAN5DPP0CG00 497 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 DLX5P56178 289 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 PPIAP62937 165 aaKnown RBP17.28■□□□□ 0.36
TPM1-226ENST00000560959 BTG2P78543 158 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 CUL1Q13616 776 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 SLC25A35Q3KQZ1 300 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 DEFB134Q4QY38 66 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 LRRC8EQ6NSJ5 796 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 ARMC2Q8NEN0 867 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 B3GNT7Q8NFL0 401 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 OR10Q1Q8NGQ4 319 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 RMND5BQ96G75 393 aaPredicted RBP17.28■□□□□ 0.36
TPM1-226ENST00000560959 SGPP1Q9BX95 441 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 DEFB127Q9H1M4 99 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 CCDC68Q9H2F9 335 aa17.28■□□□□ 0.36
TPM1-226ENST00000560959 YARS2Q9Y2Z4 477 aaKnown RBP17.28■□□□□ 0.36
TPM1-226ENST00000560959 PHF3Q92576 2039 aaKnown RBP17.28■□□□□ 0.36
TPM1-226ENST00000560959 A0A1B0GVC2 190 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 FAM47E-STBD1D6RA91 191 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 NPIPA2E9PIF3 369 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 NPIPA3F8WFD2 350 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 ACOT7O00154 380 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 NDUFS4O43181 175 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 DNAJB6O75190 326 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 IGHG3P01860 377 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 GLI4P10075 376 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 NPPBP16860 134 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 GPR85P60893 370 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 ADAM8P78325 824 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 SEL1L2Q5TEA6 688 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 DRICH1Q6PGQ1 229 aaPredicted RBP17.27■□□□□ 0.36
TPM1-226ENST00000560959 AGTRAPQ6RW13 159 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 B3GNT6Q6ZMB0 384 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 ABHD13Q7L211 337 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 BIVMQ86UB2 503 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 SLC13A5Q86YT5 568 aaPredicted RBP17.27■□□□□ 0.36
TPM1-226ENST00000560959 NT5CQ8TCD5 201 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 HAUS8Q9BT25 410 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 CLEC4MQ9H2X3 399 aaPredicted RBP17.27■□□□□ 0.36
TPM1-226ENST00000560959 LIME1Q9H400 295 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 PNPLA3Q9NST1 481 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 SH2B3Q9UQQ2 575 aa17.27■□□□□ 0.36
TPM1-226ENST00000560959 CEP104O60308 925 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 CDH1P12830 882 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 TPSB2P20231 275 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 SSR4P51571 173 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 CCR8P51685 355 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 BASP1P80723 227 aaKnown RBP17.26■□□□□ 0.35
TPM1-226ENST00000560959 RGS1Q08116 209 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 SNX1Q13596 522 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 TPSAB1Q15661 275 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 CCNG2Q16589 344 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 BBS9Q3SYG4 887 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 NDUFAF5Q5TEU4 345 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 ZNF549Q6P9A3 640 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 SLC22A16Q86VW1 577 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 TBC1D19Q8N5T2 526 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 PSD4Q8NDX1 1056 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 CD200R1Q8TD46 325 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 GPATCH1Q9BRR8 931 aaKnown RBP17.26■□□□□ 0.35
TPM1-226ENST00000560959 PARVBQ9HBI1 364 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 DEPPQ9NTK1 212 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 ZFATQ9P243 1243 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 PDE10AQ9Y233 779 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 FBN3Q75N90 2809 aa17.26■□□□□ 0.35
TPM1-226ENST00000560959 A0A0G2JNJ9 132 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 TRBV11-1A0A0K0K1C0 115 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 TRBC2A0A5B9 178 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 MAGEB16A2A368 324 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 CTAGE9A4FU28 777 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 URADA6NGE7 173 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 SLC16A5O15375 505 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 OR1F1O43749 312 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 WDR1O75083 606 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 C8GP07360 202 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 RNH1P13489 461 aaKnown RBP17.25■□□□□ 0.35
TPM1-226ENST00000560959 MAOAP21397 527 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 KIR2DL3P43628 341 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 NAE1Q13564 534 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 PIWIL4Q7Z3Z4 852 aaKnown RBP17.25■□□□□ 0.35
TPM1-226ENST00000560959 LMNTD2Q8IXW0 634 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 ZZZ3Q8IYH5 903 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 TXLNBQ8N3L3 684 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 OR2M7Q8NG81 312 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 GOT1L1Q8NHS2 421 aaPredicted RBP17.25■□□□□ 0.35
TPM1-226ENST00000560959 VMP1Q96GC9 406 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 GPR21Q99679 349 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 NECTIN3Q9NQS3 549 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 KCMF1Q9P0J7 381 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 Q9UFV3 132 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 ZFP69BQ9UJL9 534 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 FBXW2Q9UKT8 454 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 MMACHCQ9Y4U1 282 aa17.25■□□□□ 0.35
TPM1-226ENST00000560959 FAM215AQ9Y5M1 114 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms