RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 MANSC1Q9H8J5 431 aa13.28□□□□□ -0.28
PKNOX1-209ENST00000560448 SYNPO2LQ9H987 977 aa13.28□□□□□ -0.28
PKNOX1-209ENST00000560448 SLCO1B3Q9NPD5 702 aa13.28□□□□□ -0.28
PKNOX1-209ENST00000560448 WDR91A4D1P6 747 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 SYNDIG1LA6NDD5 238 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 VSTM2BA6NLU5 285 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 BIRC5O15392 142 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 DLX3O60479 287 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 KLF7O75840 302 aaPredicted RBP13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 SUPT7LO94864 414 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 CD22P20273 847 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 F8A1P23610 371 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 COL28A1Q2UY09 1125 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 MLIPQ5VWP3 458 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 CHSY3Q70JA7 882 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 SPATA21Q7Z572 469 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 YTHDF3Q7Z739 585 aaKnown RBP13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 CCDC63Q8NA47 563 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 KCT2Q8NC54 265 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 C7orf57Q8NEG2 295 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 ADAMTS18Q8TE60 1221 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 WBP1Q96G27 269 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 OR1F2PQ96R84 312 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 NPLQ9BXD5 320 aaPredicted RBP13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 NOL11Q9H8H0 719 aaKnown RBP13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 AKIRIN1Q9H9L7 192 aaPredicted RBP13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 CPNE5Q9HCH3 593 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 IL17BQ9UHF5 180 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 POLHQ9Y253 713 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 FER1L5A0AVI2 2057 aa13.27□□□□□ -0.29
PKNOX1-209ENST00000560448 CELSR3Q9NYQ7 3312 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 LRIT2A6NDA9 550 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 FOXE1O00358 373 aaPredicted RBP13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 GALR3O60755 368 aaPredicted RBP13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 PRAMEF4O60810 478 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 BPGMP07738 259 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 SMIM10L1P0DMW3 83 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 CPA3P15088 417 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 PKNOX1P55347 436 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 CLCQ05315 142 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 NKG7Q16617 165 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 PRAMEF9Q5VWM5 478 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 LIPMQ5VYY2 423 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 LCN10Q6JVE6 187 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 TRIM40Q6P9F5 258 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 FAM47EQ6ZV65 393 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 MED25Q71SY5 747 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 COX15Q7KZN9 410 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 LSM14AQ8ND56 463 aaKnown RBP13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 OR2L5Q8NG80 312 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 OR7G3Q8NG95 312 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 MIEF2Q96C03 454 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 CMTM7Q96FZ5 175 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 SMIM10Q96HG1 83 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 FAR2Q96K12 515 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 KCNC2Q96PR1 638 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 TMEM237Q96Q45 408 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 ZNF382Q96SR6 550 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 TRMOQ9BU70 441 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 REXO4Q9GZR2 422 aaKnown RBP13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 SEMA3GQ9NS98 782 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 SLC22A11Q9NSA0 550 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 TRPS1Q9UHF7 1281 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 ZNF490Q9ULM2 529 aaPredicted RBP13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 KMT2BQ9UMN6 2715 aaPredicted RBP13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 CACNA1BQ00975 2339 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 PTPRQQ9UMZ3 2332 aa13.26□□□□□ -0.29
PKNOX1-209ENST00000560448 USP24Q9UPU5 2620 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 A0A0A6YYC8 382 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 G3V2L1 256 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 I3L1I5 382 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 ERVH48-1M5A8F1 160 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 OR7A17O14581 309 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 KLHL18O94889 574 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 SERPIND1P05546 499 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 ZGLP1P0C6A0 271 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 BGNP21810 368 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 MMP11P24347 488 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 SERPINB5P36952 375 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 ARL1P40616 181 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 OR1D4P47884 311 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 CYP4F2P78329 520 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 HYAL2Q12891 473 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 LCP2Q13094 533 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 IFT88Q13099 833 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 TRAF3Q13114 568 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 RCN2Q14257 317 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 CES4AQ5XG92 561 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 C16orf46Q6P387 395 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 MILR1Q7Z6M3 343 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 MYLK4Q86YV6 388 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 TRIM42Q8IWZ5 723 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 AMER3Q8N944 861 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 RAB3IL1Q8TBN0 382 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 STT3BQ8TCJ2 826 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 UTP15Q8TED0 518 aaKnown RBP13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 SPSB2Q99619 263 aa13.25□□□□□ -0.29
PKNOX1-209ENST00000560448 ZBTB26Q9HCK0 441 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms