RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CATSPEREQ5SY80 951 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 GCNT6Q5T4J0 391 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 DEPDC1Q5TB30 811 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 AGBL4Q5VU57 503 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 PPP2R2DQ66LE6 453 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 KIAA1161Q6NSJ0 714 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 FAHD1Q6P587 224 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 VITQ6UXI7 678 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 LINC00299Q6ZSB3 139 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 KCTD8Q6ZWB6 473 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 ADGRD2Q7Z7M1 963 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SLC9B2Q86UD5 537 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 TSPYL5Q86VY4 417 aaPredicted RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 HEATR4Q86WZ0 1026 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 CLVS1Q8IUQ0 354 aaPredicted RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 MMAAQ8IVH4 418 aaKnown RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 C7orf61Q8IZ16 206 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 CLECL1Q8IZS7 167 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 C10orf111Q8N326 155 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 OR4K1Q8NGD4 311 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 RAB2BQ8WUD1 216 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 ELSPBP1Q96BH3 223 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 HSH2DQ96JZ2 352 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 PITX2Q99697 317 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 USB1Q9BQ65 265 aaKnown RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 PSD2Q9BQI7 771 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 MS4A8Q9BY19 250 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 AMBRA1Q9C0C7 1298 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 POLR1BQ9H9Y6 1135 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SMURF2Q9HAU4 748 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 NEUROD4Q9HD90 331 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 PHPT1Q9NRX4 125 aaPredicted RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 ZSCAN32Q9NX65 697 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 TAS2R9Q9NYW1 312 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SH3BP4Q9P0V3 963 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 FAM8A1Q9UBU6 413 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SCML1Q9UN30 329 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 EXO1Q9UQ84 846 aaKnown RBP9.3□□□□□ -0.92
RTF1-206ENST00000560447 ANGPT4Q9Y264 503 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 BTBD3Q9Y2F9 522 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 TPRKBQ9Y3C4 175 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 SNX5Q9Y5X3 404 aa9.3□□□□□ -0.92
RTF1-206ENST00000560447 DOCK8Q8NF50 2099 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 EME2A4GXA9 379 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 KRT87PA6NCN2 255 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ARRDC5A6NEK1 342 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ANKDD1BA6NHY2 528 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 YY2O15391 372 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 CAPN5O15484 640 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 CA3P07451 260 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 HOXC4P09017 264 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 SLC35G4P0C7Q5 338 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ARAFP10398 606 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ANXA8P13928 327 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 NELFEP18615 380 aaKnown RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 DRD3P35462 400 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 METAP1P53582 386 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 MVDP53602 400 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ABATP80404 500 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 CD47Q08722 323 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 SFSWAPQ12872 951 aaKnown RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 PMS2P3Q13401 168 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 SPIDRQ14159 915 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 HEPACAMQ14CZ8 416 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 MLC1Q15049 377 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ITPRIPL2Q3MIP1 535 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ZIK1Q3SY52 487 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 IQCCQ4KMZ1 466 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 IFI44LQ53G44 452 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 KHDRBS2Q5VWX1 349 aaKnown RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 ZNF776Q68DI1 518 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 GET4Q7L5D6 327 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 TMEM179BQ7Z7N9 219 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 TRIM74Q86UV6 250 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 CROCCP3Q8IVE0 287 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.29□□□□□ -0.92
RTF1-206ENST00000560447 RNF175Q8N4F7 328 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 SVOPQ8N4V2 548 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 C12orf76Q8N812 135 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 GPR156Q8NFN8 814 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 CDC26Q8NHZ8 85 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 OR5P2Q8WZ92 322 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 TMIGD2Q96BF3 282 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 C12orf43Q96C57 262 aaKnown RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 C7orf34Q96L11 122 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 SLC35A5Q9BS91 424 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 GABARAPL3Q9BY60 117 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 MVB12BQ9H7P6 319 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 GPN2Q9H9Y4 310 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 C1GALT1Q9NS00 363 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 SCN3BQ9NY72 215 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.29□□□□□ -0.92
RTF1-206ENST00000560447 PCDHGA8Q9Y5G5 932 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 STON1Q9Y6Q2 735 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 TRPM6Q9BX84 2022 aa9.29□□□□□ -0.92
RTF1-206ENST00000560447 A0A1W2PRB8 838 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 OTOL1A6NHN0 477 aaPredicted RBP9.28□□□□□ -0.92
RTF1-206ENST00000560447 SLC1A7O00341 560 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 CLEC3AO75596 197 aa9.28□□□□□ -0.92
RTF1-206ENST00000560447 PDE9AO76083 593 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms