RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 KLHL14Q9P2G3 628 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 C19orf25Q9UFG5 118 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-214ENST00000560402 ARL2BPQ9Y2Y0 163 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 DHRS7Q9Y394 339 aa12.85□□□□□ -0.35
SMAD3-214ENST00000560402 A0A0A6YYC8 382 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 I3L1I5 382 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 GFYI3L273 518 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 HAT1O14929 419 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 BIRC5O15392 142 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 JRKO75564 520 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 NSA2O95478 260 aaKnown RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 CRYABP02511 175 aaKnown RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 TAC1P20366 129 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 COL8A1P27658 744 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 IMPA1P29218 277 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 SLC1A2P43004 574 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 SERPINB4P48594 390 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 TDGF1P3P51864 188 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 SLC12A2P55011 1212 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 RPS15AP62244 130 aaKnown RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 PCOLCEQ15113 449 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 CCDC153Q494R4 210 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 TEDDM1Q5T9Z0 273 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 THEMIS2Q5TEJ8 643 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 LAPTM4BQ86VI4 370 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 CNTN4Q8IWV2 1026 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 LRRC56Q8IYG6 542 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 SIRT6Q8N6T7 355 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 GBP7Q8N8V2 638 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 PPP1R14CQ8TAE6 165 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 MCOLN3Q8TDD5 553 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 METTL21AQ8WXB1 218 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 THAP11Q96EK4 314 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 TSPAN17Q96FV3 270 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 MAGEB10Q96LZ2 347 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 FAM111AQ96PZ2 611 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 MESP1Q9BRJ9 268 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 PCBD2Q9H0N5 130 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 MANSC1Q9H8J5 431 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 TMEM184CQ9NVA4 438 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 STOX2Q9P2F5 926 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-214ENST00000560402 GALPQ9UBC7 116 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 TEKT2Q9UIF3 430 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 ENTPD4Q9Y227 616 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 MED16Q9Y2X0 877 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 PLLPQ9Y342 182 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 ABCA12Q86UK0 2595 aa12.84□□□□□ -0.35
SMAD3-214ENST00000560402 P2RX6O15547 441 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 HNRNPRO43390 633 aaKnown RBP12.83□□□□□ -0.36
SMAD3-214ENST00000560402 SNX3O60493 162 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 C8orf89P0DMQ9 161 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 SP140Q13342 867 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.83□□□□□ -0.36
SMAD3-214ENST00000560402 ABHD17BQ5VST6 288 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 UGT3A1Q6NUS8 523 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 DENND6AQ8IWF6 608 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 CATSPER1Q8NEC5 780 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 DNAJB8Q8NHS0 232 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 CD200R1Q8TD46 325 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 ZNF75CPQ92670 426 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-214ENST00000560402 ISL2Q96A47 359 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 VPS39Q96JC1 886 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 SLC30A3Q99726 388 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMAD3-214ENST00000560402 SYNPO2LQ9H987 977 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 FBXO6Q9NRD1 293 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-214ENST00000560402 ABI3Q9P2A4 366 aa12.83□□□□□ -0.36
SMAD3-214ENST00000560402 LRBAP50851 2863 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 KCNE1BA0A087WTH5 132 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 OR5H15A6NDH6 313 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 FFAR3O14843 346 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 KLF11O14901 512 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 GPR42O15529 346 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 ZG16O60844 167 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 EDF1O60869 148 aaKnown RBP12.82□□□□□ -0.36
SMAD3-214ENST00000560402 H2AFYO75367 372 aaKnown RBP12.82□□□□□ -0.36
SMAD3-214ENST00000560402 RASAL1O95294 804 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 DHRS4L1P0CG22 281 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 ITGAMP11215 1152 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 COL6A2P12110 1019 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 CCND1P24385 295 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 CRABP2P29373 138 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 RGS4P49798 205 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 AGTR2P50052 363 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 TBPL1P62380 186 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 FAAH2Q6GMR7 532 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 MTFR2Q6P444 385 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 SH2D5Q6ZV89 423 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 RAPH1Q70E73 1250 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 UBE2R2Q712K3 238 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-214ENST00000560402 GALNT7Q86SF2 657 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 NUDCD3Q8IVD9 361 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 CPNE9Q8IYJ1 553 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 CAMKVQ8NCB2 501 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 RELTQ969Z4 430 aa12.82□□□□□ -0.36
SMAD3-214ENST00000560402 IMMP1LQ96LU5 166 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms