RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 GALNT11Q8NCW6 608 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 IPMKQ8NFU5 416 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 OR2L2Q8NH16 312 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 OR1L3Q8NH93 324 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 CPT1CQ8TCG5 803 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 BLOC1S5Q8TDH9 187 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 TSPEARQ8WU66 669 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 THAP4Q8WY91 577 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 POP5Q969H6 163 aaKnown RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.63□□□□□ -1.51
USP3-212ENST00000559276 LINC00615Q96LM1 132 aaPredicted RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 LRFN5Q96NI6 719 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 OR52B2Q96RD2 323 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 TCF12Q99081 682 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 CD180Q99467 661 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 PKP2Q99959 881 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 NUDT9Q9BW91 350 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 GATA5Q9BWX5 397 aaPredicted RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 ING2Q9H160 280 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 KIR3DX1Q9H7L2 352 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 COPS7BQ9H9Q2 264 aaPredicted RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 LATS2Q9NRM7 1088 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 IMP3Q9NV31 184 aaKnown RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 HRASLS2Q9NWW9 162 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 FKBPLQ9UIM3 349 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 FARSAQ9Y285 508 aaKnown RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 PCDHGA9Q9Y5G4 932 aaKnown RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 CCDC88CQ9P219 2028 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 SPTBP11277 2137 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 CSMD1Q96PZ7 3565 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 LRBAP50851 2863 aa5.63□□□□□ -1.51
USP3-212ENST00000559276 SPTAN1Q13813 2472 aaKnown RBP5.63□□□□□ -1.51
USP3-212ENST00000559276 IGLV3-16A0A075B6K0 115 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ZCWPW2A0A1B0GU75 182 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 UBA6A0AVT1 1052 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 WIPF3A6NGB9 483 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 SLC9B1P1A6NJY1 282 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 TTLL8A6PVC2 850 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 TARM1B6A8C7 271 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 MASP2O00187 686 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 MEN1O00255 615 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 CCL22O00626 93 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 CPNE3O75131 537 aaKnown RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 CNOT3O75175 753 aaKnown RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 KLF7O75840 302 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 SRP72O76094 671 aaKnown RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 ZBTB11O95625 1053 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 GPIP06744 558 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 CTSBP07858 339 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 RAB40ALP0C0E4 278 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 MSL3P1P0C860 447 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 PRSS56P0CW18 603 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ENO3P13929 434 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 HSD17B1P14061 328 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ST6GAL1P15907 406 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 POLR2CP19387 275 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 HLA-DPA1P20036 260 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 DCKP27707 260 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 PDHA2P29803 388 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 SLC26A3P40879 764 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 GABRA4P48169 554 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 MRPL19P49406 292 aaKnown RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 CDKN1CP49918 316 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 CCL11P51671 97 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ZNF140P52738 457 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 SESN2P58004 480 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 FOXL2P58012 376 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 PSME3P61289 254 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ATP6V0D1P61421 351 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 CDKL1Q00532 357 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 MRPL49Q13405 166 aaKnown RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 GTF2H3Q13889 308 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 PRPSAP1Q14558 356 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 PLCL1Q15111 1095 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ZIC1Q15915 447 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 BCL7AQ4VC05 210 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 C4orf17Q53FE4 359 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ARL13AQ5H913 290 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 NHSL2Q5HYW2 709 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 CRB2Q5IJ48 1285 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 TMTC4Q5T4D3 741 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 C6orf52Q5T4I8 152 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 VWA5B1Q5TIE3 1220 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ZDHHC20Q5W0Z9 365 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 KCTD11Q693B1 232 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 SLC6A19Q695T7 634 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 JMJD6Q6NYC1 403 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 C8orf82Q6P1X6 216 aaPredicted RBP5.62□□□□□ -1.51
USP3-212ENST00000559276 KLHL35Q6PF15 583 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 FRA10AC1Q70Z53 315 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 PID1Q7Z2X4 250 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 ATCAYQ86WG3 371 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 SLC22A9Q8IVM8 553 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 LILRA2Q8N149 483 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 CARFQ8N187 725 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 HIPK4Q8NE63 616 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 FDCSPQ8NFU4 85 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 OR4E2Q8NGC2 313 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 OR4K2Q8NGD2 314 aa5.62□□□□□ -1.51
USP3-212ENST00000559276 OR13C4Q8NGS5 318 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms