RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PIK3CBP42338 1070 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 HNRNPFP52597 415 aaKnown RBP10.32□□□□□ -0.76
TPM1-217ENST00000559108 PLA2G16P53816 162 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 PKNOX1P55347 436 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 BST1Q10588 318 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 DNASE1L3Q13609 305 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 RUNX2Q13950 521 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 DSG2Q14126 1118 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 RCN2Q14257 317 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 ABRAXAS2Q15018 415 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 NCF4Q15080 339 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 MUM1Q2TAK8 710 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 VWA2Q5GFL6 755 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 PAGE2BQ5JRK9 111 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 YOD1Q5VVQ6 348 aaPredicted RBP10.32□□□□□ -0.76
TPM1-217ENST00000559108 GARNL3Q5VVW2 1013 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 KHDRBS2Q5VWX1 349 aaKnown RBP10.32□□□□□ -0.76
TPM1-217ENST00000559108 KANK2Q63ZY3 851 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 CYB5D1Q6P9G0 228 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 LAPTM4BQ86VI4 370 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 NUDCD3Q8IVD9 361 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 ESX1Q8N693 406 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 ENDOVQ8N8Q3 282 aaKnown RBP10.32□□□□□ -0.76
TPM1-217ENST00000559108 TMEM52Q8NDY8 209 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 TRPV3Q8NET8 790 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 OR2T11Q8NH01 316 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 PROKR1Q8TCW9 393 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 AGR3Q8TD06 166 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 UCN3Q969E3 161 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 MMABQ96EY8 250 aaPredicted RBP10.32□□□□□ -0.76
TPM1-217ENST00000559108 C17orf62Q9BQA9 187 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 ACPTQ9BZG2 426 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 PITHD1Q9GZP4 211 aaPredicted RBP10.32□□□□□ -0.76
TPM1-217ENST00000559108 DRC3Q9H069 523 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 STMN4Q9H169 189 aaPredicted RBP10.32□□□□□ -0.76
TPM1-217ENST00000559108 TXLNGQ9NUQ3 528 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 ZDHHC2Q9UIJ5 367 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 MID2Q9UJV3 735 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 PADI1Q9ULC6 663 aa10.32□□□□□ -0.76
TPM1-217ENST00000559108 CFAP47Q6ZTR5 3102 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 IGLV3-12A0A075B6K2 115 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 A0A087WV48 116 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 ANKDD1BA6NHY2 528 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 VSTM2BA6NLU5 285 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 HMGB1P1B2RPK0 211 aaPredicted RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 FAM227AF5H4B4 570 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 TGFBR3LH3BV60 316 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 TMPRSS11DO60235 418 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 EEDO75530 441 aaKnown RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 MLYCDO95822 493 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 SERPINE1P05121 402 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 TCN2P20062 427 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 BSGP35613 385 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 ARSFP54793 590 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 DCDP81605 110 aaKnown RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 FOXK2Q01167 660 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 RGS1Q08116 209 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 ABHD18Q0P651 414 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 GALNT1Q10472 559 aaPredicted RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 TBL3Q12788 808 aaKnown RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 FAM53BQ14153 422 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 ERV3-1Q14264 604 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 NKG7Q16617 165 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 FAM214AQ32MH5 1076 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 DEPDC1Q5TB30 811 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 ARHGAP40Q5TG30 622 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 OVCH1Q7RTY7 1134 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 ZNF781Q8N8C0 355 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 OR2L5Q8NG80 312 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 METTL6Q8TCB7 284 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 GAL3ST3Q96A11 431 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 CNDP1Q96KN2 507 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 CSF3RQ99062 836 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 PAIP2Q9BPZ3 127 aaKnown RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 MRPL1Q9BYD6 325 aaKnown RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 SLC29A3Q9BZD2 475 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 REXO4Q9GZR2 422 aaKnown RBP10.31□□□□□ -0.76
TPM1-217ENST00000559108 ACTL8Q9H568 366 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 CPNE5Q9HCH3 593 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 ZNF304Q9HCX3 659 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 GIMAP2Q9UG22 337 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 FIS1Q9Y3D6 152 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 PCDHGA11Q9Y5H2 935 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 CLDN16Q9Y5I7 305 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 DNAJC15Q9Y5T4 150 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 MED13Q9UHV7 2174 aa10.31□□□□□ -0.76
TPM1-217ENST00000559108 WASHC1A8K0Z3 465 aa10.3□□□□□ -0.76
TPM1-217ENST00000559108 FOXE1O00358 373 aaPredicted RBP10.3□□□□□ -0.76
TPM1-217ENST00000559108 NKX2-8O15522 239 aa10.3□□□□□ -0.76
TPM1-217ENST00000559108 CHST10O43529 356 aa10.3□□□□□ -0.76
TPM1-217ENST00000559108 SNNO75324 88 aaPredicted RBP10.3□□□□□ -0.76
TPM1-217ENST00000559108 PRKRAO75569 313 aaKnown RBP10.3□□□□□ -0.76
TPM1-217ENST00000559108 SCELO95171 688 aa10.3□□□□□ -0.76
TPM1-217ENST00000559108 RECKO95980 971 aa10.3□□□□□ -0.76
TPM1-217ENST00000559108 GBAP04062 536 aa10.3□□□□□ -0.76
TPM1-217ENST00000559108 ENO1P06733 434 aaKnown RBP10.3□□□□□ -0.76
TPM1-217ENST00000559108 HBQ1P09105 142 aa10.3□□□□□ -0.76
TPM1-217ENST00000559108 FBLP22087 321 aaKnown RBP10.3□□□□□ -0.76
TPM1-217ENST00000559108 ATP5A1P25705 553 aaKnown RBP10.3□□□□□ -0.76
TPM1-217ENST00000559108 GSTM2P28161 218 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms