RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 FAM220BPB1ANY3 271 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 GNSP15586 552 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 ZNF26P17031 533 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-207ENST00000558763 EFNA1P20827 205 aaPredicted RBP12.37□□□□□ -0.43
SMAD3-207ENST00000558763 CXCR2P25025 360 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 SLC19A1P41440 591 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 ACTR1BP42025 376 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 ACTR1AP61163 376 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 MC1RQ01726 317 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 EIF2B5Q13144 721 aaKnown RBP12.37□□□□□ -0.43
SMAD3-207ENST00000558763 GRAMD1BQ3KR37 738 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 GLYATQ6IB77 296 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 UBE3DQ7Z6J8 389 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 PROSER1Q86XN7 944 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 MMP21Q8N119 569 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 TMEM132CQ8N3T6 1108 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 RAB42Q8N4Z0 105 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 OR2L3Q8NG85 312 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 FLVCR1-AS1Q8TAF5 88 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 CXorf40BQ96DE9 158 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 PHF12Q96QT6 1004 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 F2RL3Q96RI0 385 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 THUMPD3Q9BV44 507 aaKnown RBP12.37□□□□□ -0.43
SMAD3-207ENST00000558763 REEP4Q9H6H4 257 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 GORASP2Q9H8Y8 452 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 ADGRE2Q9UHX3 823 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 BTNL2Q9UIR0 455 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 DTNAQ9Y4J8 743 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 HEBP2Q9Y5Z4 205 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 GMEB1Q9Y692 573 aa12.37□□□□□ -0.43
SMAD3-207ENST00000558763 A0A1B0GTW7 788 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 A0A1B0GVT2 93 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 RTCAO00442 366 aaKnown RBP12.36□□□□□ -0.43
SMAD3-207ENST00000558763 VILLO15195 856 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 STAMBPO95630 424 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 KLK1P06870 262 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 F3P13726 295 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 PSMA4P25789 261 aaKnown RBP12.36□□□□□ -0.43
SMAD3-207ENST00000558763 HPCAL1P37235 193 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 NUBP1P53384 320 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 NXPH1P58417 271 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 PHEXP78562 749 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 HYAL2Q12891 473 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 GAB1Q13480 694 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 CYP51A1Q16850 503 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 CPTPQ5TA50 214 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 ZNF425Q6IV72 752 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 AMIGO2Q86SJ2 522 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 FAM86B1Q8N7N1 296 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 OR52E4Q8NGH9 312 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 GBP5Q96PP8 586 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 SH3GL1Q99961 368 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 SARGQ9BW04 601 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 TRIM4Q9C037 500 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 SEMA6AQ9H2E6 1030 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 VCX3BQ9H321 246 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 MAPRE3Q9UPY8 281 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 CACNA1HO95180 2353 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 C4orf51C9J302 202 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 RNASET2O00584 256 aaKnown RBP12.36□□□□□ -0.43
SMAD3-207ENST00000558763 SLC34A2O95436 690 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 BMP2P12643 396 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 SERPINB1P30740 379 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 BCL6P41182 706 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 POLE2P56282 527 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 TAS2R50P59544 299 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 TEAD4Q15561 434 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 NKG7Q16617 165 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 AASDHQ4L235 1098 aaPredicted RBP12.36□□□□□ -0.43
SMAD3-207ENST00000558763 TBCELQ5QJ74 424 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 DCP2Q8IU60 420 aaKnown RBP12.36□□□□□ -0.43
SMAD3-207ENST00000558763 EPHX4Q8IUS5 362 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 SFTPA2Q8IWL1 248 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 MICU2Q8IYU8 434 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 TRPV3Q8NET8 790 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 GPBAR1Q8TDU6 330 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 NSMCE2Q96MF7 247 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 PANX1Q96RD7 426 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 TBCDQ9BTW9 1192 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 CHST8Q9H2A9 424 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 FSCN3Q9NQT6 498 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 OR6C2Q9NZP2 312 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 SUSD2Q9UGT4 822 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 AURKCQ9UQB9 309 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 AP3M1Q9Y2T2 418 aa12.36□□□□□ -0.43
SMAD3-207ENST00000558763 TRBC2A0A5B9 178 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ELOVL7A1L3X0 281 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ANKDD1BA6NHY2 528 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 BTN3A3O00478 584 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 HAT1O14929 419 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 PPM1DO15297 605 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 OR1F1O43749 312 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 CLEC3AO75596 197 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 TNFP01375 233 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 CFIP05156 583 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 ANXA6P08133 673 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 IL3P08700 152 aa12.35□□□□□ -0.43
SMAD3-207ENST00000558763 CHRM5P08912 532 aaPredicted RBP12.35□□□□□ -0.43
SMAD3-207ENST00000558763 UMPSP11172 480 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms