RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PLA2G16P53816 162 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 EEF1A2Q05639 463 aaKnown RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 DDX39BQ13838 428 aaKnown RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 RUNX2Q13950 521 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 E2F2Q14209 437 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 HERC3Q15034 1050 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 TBCCQ15814 346 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 HIST2H2ACQ16777 129 aaPredicted RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 MINDY4Q4G0A6 757 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 MFSD4BQ5TF39 518 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 HIST2H2AA3Q6FI13 130 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 PARP9Q8IXQ6 854 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 C4orf33Q8N1A6 199 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 FDCSPQ8NFU4 85 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 MTFMTQ96DP5 389 aaKnown RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 MS4A6EQ96DS6 147 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 TGIF2Q9GZN2 237 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 ACTR8Q9H981 624 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 SEMA4BQ9NPR2 832 aaPredicted RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 FBXL4Q9UKA2 621 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 NXT1Q9UKK6 140 aaKnown RBP13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 EMCNQ9ULC0 261 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 TP53TG5Q9Y2B4 290 aa13.07□□□□□ -0.32
TSPAN3-205ENST00000558745 CFAP46Q8IYW2 2715 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 AGPSO00116 658 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 RTCAO00442 366 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 ERI3O43414 337 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 CLEC3AO75596 197 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 Q0VFX4 171 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 LAPTM5Q13571 262 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 CPSF6Q16630 551 aaKnown RBP eCLIP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 UNC50Q53HI1 259 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 PAGE2BQ5JRK9 111 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 DCAF10Q5QP82 559 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 GRHL2Q6ISB3 625 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 MED27Q6P2C8 311 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 EMBQ6PCB8 327 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 LANCL3Q6ZV70 420 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 MED25Q71SY5 747 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 ABHD13Q7L211 337 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 UBE3DQ7Z6J8 389 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 TDRPQ86YL5 185 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 TMEM102Q8N9M5 508 aaPredicted RBP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 OR7G3Q8NG95 312 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 OR11G2Q8NGC1 345 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 C9orf43Q8TAL5 461 aaPredicted RBP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 ACMSDQ8TDX5 336 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF473Q8WTR7 871 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 CAVIN3Q969G5 261 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 ATP6V1E2Q96A05 226 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 NUDT9Q9BW91 350 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 VN1R1Q9GZP7 353 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 REXO4Q9GZR2 422 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 SLC25A18Q9H1K4 315 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 ADNPQ9H2P0 1102 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 SEMA3GQ9NS98 782 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 PCTPQ9UKL6 214 aa13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 TNPO3Q9Y5L0 923 aaKnown RBP13.06□□□□□ -0.32
TSPAN3-205ENST00000558745 STX16-NPEPL1H3BU86 382 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 STX16O14662 325 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 B4GALT2O60909 372 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 CELA2AP08217 269 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 NUDT17P0C025 328 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 ARL1P40616 181 aaPredicted RBP13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 BTG2P78543 158 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 PCDH1Q08174 1060 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 LAS2Q8IYD9 372 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 CA13Q8N1Q1 262 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 TTLQ8NG68 377 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 HUS1BQ8NHY5 278 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 TSLPQ969D9 159 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 QRFPRQ96P65 431 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 MTERF1Q99551 399 aaKnown RBP13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 SLC25A23Q9BV35 468 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 SORBS1Q9BX66 1292 aaKnown RBP13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 OR51B5Q9H339 312 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 ZNF160Q9HCG1 818 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 LANCL2Q9NS86 450 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 C14orf105Q9NVL8 296 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 DCDC2Q9UHG0 476 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 RAB21Q9UL25 225 aa13.05□□□□□ -0.32
TSPAN3-205ENST00000558745 TLN1Q9Y490 2541 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 URADA6NGE7 173 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 G3V2L1 256 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 MKRN2OSH3BPM6 223 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 CDH16O75309 829 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 IGHEP01854 428 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 RPS17P08708 135 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 KRT4P19013 534 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 CERS1P27544 350 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 CCNG1P51959 295 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 STXBP1P61764 594 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 RPS13P62277 151 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 IFFO1Q0D2I5 559 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 ZRSR2Q15696 482 aaKnown RBP13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 ADPRMQ3LIE5 342 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 TUBB8Q3ZCM7 444 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 LIPJQ5W064 366 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 ABHD17CQ6PCB6 329 aa13.04□□□□□ -0.32
TSPAN3-205ENST00000558745 GALNT16Q8N428 558 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms