RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OLR1P78380 273 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 BTN3A2P78410 334 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PHEXP78562 749 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF844Q08AG5 666 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 CHAF1BQ13112 559 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 TRAF3Q13114 568 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 CPSF6Q16630 551 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF678Q5SXM1 525 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 MFSD4BQ5TF39 518 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PCSK4Q6UW60 755 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PPP1R32Q7Z5V6 425 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 LAPTM4BQ86VI4 370 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ZC3H7AQ8IWR0 971 aaKnown RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 L3MBTL4Q8NA19 623 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 OR5T3Q8NGG3 340 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF473Q8WTR7 871 aaKnown RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 REPS1Q96D71 796 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 MS4A6EQ96DS6 147 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 WBP1Q96G27 269 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 SMIM10Q96HG1 83 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ZIM3Q96PE6 472 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 TMEM237Q96Q45 408 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 NTMT1Q9BV86 223 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 C1QTNF3Q9BXJ4 246 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ERVK-6Q9BXR3 956 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 TGIF2Q9GZN2 237 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 IQCGQ9H095 443 aaKnown RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 C12orf65Q9H3J6 166 aaKnown RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 RRAGDQ9NQL2 400 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ACSS2Q9NR19 701 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 P4HTMQ9NXG6 502 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 ADGRE2Q9UHX3 823 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 C3orf18Q9UK00 162 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 MKL2Q9ULH7 1088 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 PCSK5Q92824 1860 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 BOD1L1Q8NFC6 3051 aa11.69□□□□□ -0.54
SMAD3-205ENST00000558428 DOCK10Q96BY6 2186 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 A0A088AWK7 358 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 CCDC151A5D8V7 595 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 IDSB3KWA1 339 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 H0YIV9 168 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 RGS16O15492 202 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 SH3BGRLO75368 114 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 JRKO75564 520 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 OTCP00480 354 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 TGFB1P01137 390 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 IMPDH1P20839 514 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 ZNF10P21506 573 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 EMP2P54851 167 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 CLCQ05315 142 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 TGM3Q08188 693 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 LY6DQ14210 128 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 ZRSR2Q15696 482 aaKnown RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 ADPRMQ3LIE5 342 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 MINDY4Q4G0A6 757 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 UNC50Q53HI1 259 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 CPZQ66K79 652 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 TTC19Q6DKK2 380 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 TRIM40Q6P9F5 258 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 ZYG11AQ6WRX3 759 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 MED25Q71SY5 747 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 MILR1Q7Z6M3 343 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 APLFQ8IW19 511 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 SHISA5Q8N114 240 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 RNF175Q8N4F7 328 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 TMEM102Q8N9M5 508 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 OR2L5Q8NG80 312 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 OR4F6Q8NGB9 312 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 HUS1BQ8NHY5 278 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 TRPC4APQ8TEL6 797 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 NACC2Q96BF6 587 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 CCDC126Q96EE4 140 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 CMTM7Q96FZ5 175 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 PEX11GQ96HA9 241 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 APOPT1Q96IL0 206 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 BBC3Q96PG8 261 aaPredicted RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 F2RL3Q96RI0 385 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 SMC6Q96SB8 1091 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 MTERF1Q99551 399 aaKnown RBP11.68□□□□□ -0.54
SMAD3-205ENST00000558428 MS4A8Q9BY19 250 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 RBCK1Q9BYM8 510 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 ING2Q9H160 280 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 MKS1Q9NXB0 559 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 MID2Q9UJV3 735 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 HS3ST3B1Q9Y662 390 aa11.68□□□□□ -0.54
SMAD3-205ENST00000558428 COL6A6A6NMZ7 2263 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 G3V2L1 256 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 AGPSO00116 658 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 PPP6CO00743 305 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 SOCS6O14544 535 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 CHST10O43529 356 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 DNAJB6O75190 326 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 SPAG7O75391 227 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 DNAJB5O75953 348 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 CPA3P15088 417 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 PIK3CBP42338 1070 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 RRADP55042 308 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 KCNAB2Q13303 367 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 GGTA1PQ4G0N0 100 aa11.67□□□□□ -0.54
SMAD3-205ENST00000558428 CEP85LQ5SZL2 805 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms