RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 MYBPHQ13203 477 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 GSTA3Q16772 222 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 IMMTQ16891 758 aaKnown RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 ALG11Q2TAA5 492 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 SETMARQ53H47 684 aaPredicted RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 C20orf194Q5TEA3 1177 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 TMEM215Q68D42 235 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 TPGS1Q6ZTW0 290 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 HAPLN4Q86UW8 402 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 RBMXL3Q8N7X1 1067 aaKnown RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 SCCPDHQ8NBX0 429 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 ETNPPLQ8TBG4 499 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 STARD8Q92502 1023 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 RND1Q92730 232 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 NAT6Q93015 286 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 C18orf12Q96KH6 178 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 LMLNQ96KR4 655 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 DUX5Q96PT3 197 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 CMKLR1Q99788 373 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 C1QTNF4Q9BXJ3 329 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 C2orf40Q9H1Z8 148 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 GPN2Q9H9Y4 310 aaPredicted RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 KRT84Q9NSB2 600 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 HAUS2Q9NVX0 235 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 BARHL2Q9NY43 387 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 TAS2R10Q9NYW0 307 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 RCOR1Q9UKL0 485 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 MKLN1Q9UL63 735 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 NCKAP1Q9Y2A7 1128 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 CAPN7Q9Y6W3 813 aa5.49□□□□□ -1.53
RTF1-204ENST00000558117 TNRC6AQ8NDV7 1962 aaKnown RBP5.49□□□□□ -1.53
RTF1-204ENST00000558117 ZGRF1Q86YA3 2104 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 IGLV5-37A0A075B6J1 123 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 TMEM202A6NGA9 273 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 LRRC53A6NM62 1247 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 C19orf84I3L1E1 186 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 NDUFS7O75251 213 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 CD58P19256 250 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 CYP3A5P20815 502 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 CHMLP26374 656 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 GABRB2P47870 512 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 SORDQ00796 357 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 MYL7Q01449 175 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 SPAG1Q07617 926 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 BECN1Q14457 450 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 FGFBP1Q14512 234 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 ZNF542PQ5EBM4 170 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 ZNF776Q68DI1 518 aaPredicted RBP5.48□□□□□ -1.53
RTF1-204ENST00000558117 SPSB3Q6PJ21 355 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 LINGO4Q6UY18 593 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 QSOX2Q6ZRP7 698 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 LINGO2Q7L985 606 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 NR2C2APQ86WQ0 139 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 APLFQ8IW19 511 aaPredicted RBP5.48□□□□□ -1.53
RTF1-204ENST00000558117 THEM5Q8N1Q8 247 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 METTL6Q8TCB7 284 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 GANCQ8TET4 914 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 VMP1Q96GC9 406 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 PIWIL1Q96J94 861 aaKnown RBP5.48□□□□□ -1.53
RTF1-204ENST00000558117 OR1F2PQ96R84 312 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 PKMYT1Q99640 499 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 TXLNGYQ9BZA5 131 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 SLC6A13Q9NSD5 602 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 SLCO3A1Q9UIG8 710 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 SCML1Q9UN30 329 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 SNX9Q9Y5X1 595 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 NFS1Q9Y697 457 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 CSNK1G3Q9Y6M4 447 aa5.48□□□□□ -1.53
RTF1-204ENST00000558117 TDRD6O60522 2096 aaKnown RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 SERINC4A6NH21 518 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 NPIPB15A6NHN6 443 aaPredicted RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 SMTNL1A8MU46 457 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 USP17L23D6RBM5 183 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 SLC16A5O15375 505 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 COCHO43405 550 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 SPRY1O43609 319 aaPredicted RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 LY6G6DO95868 133 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 RPLP0P05388 317 aaKnown RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 IGHV4-30-4P0DP06 118 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 BRWD1-AS2P59051 145 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 ARF3P61204 181 aaPredicted RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 HNRNPKP61978 463 aaKnown RBP eCLIP5.47□□□□□ -1.53
RTF1-204ENST00000558117 ARF1P84077 181 aaKnown RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 CDC16Q13042 620 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 PPP2R5CQ13362 524 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 PDIA5Q14554 519 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 C16orf72Q14CZ0 275 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 E2F5Q15329 346 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 CALCRLQ16602 461 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 DEFB133Q30KQ1 61 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 POM121L1PQ3SYA9 428 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 CFAP221Q4G0U5 840 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 DCAF10Q5QP82 559 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 SNX30Q5VWJ9 437 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 WSCD1Q658N2 575 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 SLC30A6Q6NXT4 461 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 RPUSD3Q6P087 351 aaKnown RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 PRPF39Q86UA1 669 aaKnown RBP5.47□□□□□ -1.53
RTF1-204ENST00000558117 FOXRED2Q8IWF2 684 aa5.47□□□□□ -1.53
RTF1-204ENST00000558117 NDUFAF2Q8N183 169 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms