RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 KIF5CO60282 957 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 GALR3O60755 368 aaPredicted RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 PRAF2O60831 178 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 LRCH4O75427 683 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 EEF2P13639 858 aaKnown RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 FOLR2P14207 255 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 TCF4P15884 667 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 PDGFRAP16234 1089 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 GOT1P17174 413 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 DUTP33316 252 aaKnown RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 PEX19P40855 299 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 NDUFV3P56181 108 aaKnown RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 SRPXP78539 464 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ZNF273Q14593 569 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 HSP90AB3PQ58FF7 597 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ZRANB3Q5FWF4 1079 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.69□□□□□ -1.98
SPG11-206ENST00000558093 SEL1L3Q68CR1 1132 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 Q71RC1 249 aaPredicted RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 ANKRD33Q7Z3H0 272 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 SPATA21Q7Z572 469 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ABI3BPQ7Z7G0 1075 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 LCA5Q86VQ0 697 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 ANP32BQ92688 251 aaKnown RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 TBC1D31Q96DN5 1066 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 SIPA1Q96FS4 1042 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 FER1L6-AS2Q96M78 137 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 MGME1Q9BQP7 344 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ALKBH7Q9BT30 221 aaPredicted RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 RBM24Q9BX46 236 aaKnown RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 OCR1Q9BZK8 76 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 STRADBQ9C0K7 418 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 OR10A4Q9H209 315 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ADNPQ9H2P0 1102 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 PNNQ9H307 717 aaKnown RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 ST6GALNAC4Q9H4F1 302 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 RAB9BQ9NP90 201 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 IARS2Q9NSE4 1012 aaKnown RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 PDRG1Q9NUG6 133 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 PRR34Q9NV39 138 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 MRGBPQ9NV56 204 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 DBF4Q9UBU7 674 aaPredicted RBP2.69□□□□□ -1.98
SPG11-206ENST00000558093 SATB2Q9UPW6 733 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 AUP1Q9Y679 476 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 ARID2Q68CP9 1835 aa2.69□□□□□ -1.98
SPG11-206ENST00000558093 GLTPD2A6NH11 291 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 C19orf81C9J6K1 198 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 PRSS46E5RG02 174 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 INPP4BO15327 924 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 SIGLEC5O15389 551 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 PPIP5K2O43314 1243 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 GPRIN2O60269 458 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 IGKV3-15P01624 115 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 MELTFP08582 738 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 GP9P14770 177 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 GLULP15104 373 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 CD1DP15813 335 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 PTAFRP25105 342 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 CRKLP46109 303 aaKnown RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 OR3A3P47888 321 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 NPY4RP50391 375 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 RIDAP52758 137 aaKnown RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 BTG1P62324 171 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 PPA1Q15181 289 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 TAZQ16635 292 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 EIPR1Q53HC9 387 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 SPANXN4Q5MJ08 99 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 C6orf136Q5SQH8 315 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 FAM182AQ5T1J6 154 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 FAM46CQ5VWP2 391 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 Q6ZR54 194 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 TRMT11Q7Z4G4 463 aaKnown RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 GPR141Q7Z602 305 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 PHC2Q8IXK0 858 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 DND1Q8IYX4 353 aaKnown RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 APCDD1Q8J025 514 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 FBXL16Q8N461 479 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 TEX26Q8N6G2 289 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 ZNF713Q8N859 430 aaPredicted RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 ARL10Q8N8L6 244 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 SUMF1Q8NBK3 374 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 ZPLD1Q8TCW7 415 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 HEXDCQ8WVB3 486 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 RAD54LQ92698 747 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 RAB3IPQ96QF0 476 aaPredicted RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 PCDHB18PQ96TA0 734 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 PAPOLGQ9BWT3 736 aaKnown RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 AP1M1Q9BXS5 423 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 XPO4Q9C0E2 1151 aaKnown RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 SP140LQ9H930 580 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 CFDP1Q9UEE9 299 aaPredicted RBP2.68□□□□□ -1.98
SPG11-206ENST00000558093 GMEB2Q9UKD1 530 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 RABL2BQ9UNT1 228 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 NEDD4P46934 1319 aa2.68□□□□□ -1.98
SPG11-206ENST00000558093 GTPBP10A4D1E9 387 aaKnown RBP2.67□□□□□ -1.98
SPG11-206ENST00000558093 ERICH4A6NGS2 130 aa2.67□□□□□ -1.98
SPG11-206ENST00000558093 SHISA7A6NL88 538 aa2.67□□□□□ -1.98
SPG11-206ENST00000558093 SRRM5B3KS81 715 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms