RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 STXBP1P61764 594 aaKnown RBP13.73□□□□□ -0.21
SHMT2-235ENST00000557740 ALDH6A1Q02252 535 aaKnown RBP13.73□□□□□ -0.21
SHMT2-235ENST00000557740 ILF2Q12905 390 aaKnown RBP13.73□□□□□ -0.21
SHMT2-235ENST00000557740 NAA30Q147X3 362 aaPredicted RBP13.73□□□□□ -0.21
SHMT2-235ENST00000557740 TSNQ15631 228 aaKnown RBP13.73□□□□□ -0.21
SHMT2-235ENST00000557740 SPINK14Q6IE38 97 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 CAPN12Q6ZSI9 719 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 TTLQ8NG68 377 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 CCT6BQ92526 530 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 MARVELD3Q96A59 401 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 CCDC120Q96HB5 630 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 FAR2Q96K12 515 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 HES7Q9BYE0 225 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 CDCP1Q9H5V8 836 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 GPAMQ9HCL2 828 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 PRDM9Q9NQV7 894 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 MOCS1Q9NZB8 636 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 CACNA1DQ01668 2161 aa13.73□□□□□ -0.21
SHMT2-235ENST00000557740 CTAGE15A4D2H0 777 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 NCF1BA6NI72 391 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 SAGE2PA6NJ88 616 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 NCF1CA8MVU1 366 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 E7ESA3 106 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 H2AFYO75367 372 aaKnown RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 SLC25A12O75746 678 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 NCF1P14598 390 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 GNAZP19086 355 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 RPL21P46778 160 aaKnown RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 BTG2P78543 158 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 SLBPQ14493 270 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 RPTNQ6XPR3 784 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 CTAGE6Q86UF2 777 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 RPS19BP1Q86WX3 136 aaKnown RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 TICAM1Q8IUC6 712 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 KIF2BQ8N4N8 673 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 BBOF1Q8ND07 529 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 ELP5Q8TE02 316 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 CREB3L4Q8TEY5 395 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 ITLN2Q8WWU7 325 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 GAL3ST3Q96A11 431 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 SCMH1Q96GD3 660 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 KRT12Q99456 494 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 TSPAN10Q9H1Z9 355 aaPredicted RBP13.72□□□□□ -0.21
SHMT2-235ENST00000557740 KLHL31Q9H511 634 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 POPDC3Q9HBV1 291 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 LRFN1Q9P244 771 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 TXNDC16Q9P2K2 825 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 SNX24Q9Y343 169 aa13.72□□□□□ -0.21
SHMT2-235ENST00000557740 SCN2AQ99250 2005 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ABCA12Q86UK0 2595 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 A0A088AWK7 358 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 IGKV3D-11A0A0A0MRZ8 115 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 TCRBV16S1A1N1A0A5B0 115 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ASPDHA6ND91 283 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ENO4A6NNW6 628 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 FCHO1O14526 889 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 TP73O15350 636 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ZNF10P21506 573 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 TPP2P29144 1249 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 GDF5P43026 501 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 BTN3A2P78410 334 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 POU4F1Q01851 419 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 HYAL2Q12891 473 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 CALCOCO2Q13137 446 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ART3Q13508 389 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 C18orf21Q32NC0 220 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 KRTCAP3Q53RY4 240 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 SLC25A25Q6KCM7 469 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 TMIGD1Q6UXZ0 262 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 GALNTL5Q7Z4T8 443 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 CEP97Q8IW35 865 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 KRT78Q8N1N4 520 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 CA13Q8N1Q1 262 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ZNF808Q8N4W9 903 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 THAP3Q8WTV1 239 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ANKRD49Q8WVL7 239 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 ANP32BQ92688 251 aaKnown RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 CDKL2Q92772 493 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 RHBDF1Q96CC6 855 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 TSPAN17Q96FV3 270 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 GPR137Q96N19 417 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 FRMD6Q96NE9 622 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 UNKQ9C0B0 810 aaKnown RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 DERL2Q9GZP9 239 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 RUBCNLQ9H714 662 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 WWOXQ9NZC7 414 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 RNF14Q9UBS8 474 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 MMACHCQ9Y4U1 282 aa13.71□□□□□ -0.21
SHMT2-235ENST00000557740 KLF2Q9Y5W3 355 aaPredicted RBP13.71□□□□□ -0.21
SHMT2-235ENST00000557740 CELSR2Q9HCU4 2923 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 A8MUA0 341 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 C4orf51C9J302 202 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 NPIPA5E9PKD4 350 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 CDK2AP1O14519 115 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 ERI3O43414 337 aaKnown RBP13.7□□□□□ -0.22
SHMT2-235ENST00000557740 NME2P1O60361 137 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 PIAS1O75925 651 aa13.7□□□□□ -0.22
SHMT2-235ENST00000557740 NEURL1O76050 574 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms