RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SOCS6O14544 535 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 FFAR3O14843 346 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 GPR42O15529 346 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 CDH16O75309 829 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 CEACAM4O75871 244 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 DNAJB5O75953 348 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 C1QL1O75973 258 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 SHBGP04278 402 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 TUBBP07437 444 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 ACPPP15309 386 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 CD22P20273 847 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 HSD17B3P37058 310 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 XCR1P46094 333 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 SNRPNP63162 240 aaKnown RBP11.81□□□□□ -0.52
SLIRP-211ENST00000557623 HYAL2Q12891 473 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 NFATC3Q12968 1075 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 DEFB134Q4QY38 66 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 MFSD4BQ5TF39 518 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 GRHL2Q6ISB3 625 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 KIRREL2Q6UWL6 708 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 GOLGA7Q7Z5G4 137 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 HPS6Q86YV9 775 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 SRFBP1Q8NEF9 429 aaKnown RBP11.81□□□□□ -0.52
SLIRP-211ENST00000557623 MZB1Q8WU39 189 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 METTL21AQ8WXB1 218 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 REPS1Q96D71 796 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 PHF21BQ96EK2 531 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 KLHL31Q9H511 634 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 ACTR8Q9H981 624 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 FBXL4Q9UKA2 621 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 MKL2Q9ULH7 1088 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 IGSF10Q6WRI0 2623 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 DOCK10Q96BY6 2186 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 B8ZZF3 427 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 ALOX12BO75342 701 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 SIX3O95343 332 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 HPP00738 406 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 PCNAP12004 261 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 KRT15P19012 456 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 JAK1P23458 1154 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 EEF1DP29692 281 aaKnown RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 SLCO1A2P46721 670 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 PGDP52209 483 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 SOX8P57073 446 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 RAB8AP61006 207 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 PHEXP78562 749 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 ERCC6LQ2NKX8 1250 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 ADPRMQ3LIE5 342 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 MINDY4Q4G0A6 757 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 IRAK1BP1Q5VVH5 260 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 TRIM40Q6P9F5 258 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 NDUFAF7Q7L592 441 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 MYLK4Q86YV6 388 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 TMEM151BQ8IW70 566 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 LAS2Q8IYD9 372 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 GALNT16Q8N428 558 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 RIBC1Q8N443 379 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 FDCSPQ8NFU4 85 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 OR2L5Q8NG80 312 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 OR11G2Q8NGC1 345 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 AENQ8WTP8 325 aaKnown RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 CAVIN3Q969G5 261 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 ATP6V1E2Q96A05 226 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 TBC1D20Q96BZ9 403 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 MS4A6EQ96DS6 147 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 PEX11GQ96HA9 241 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 NPLQ9BXD5 320 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 REXO4Q9GZR2 422 aaKnown RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 IPPKQ9H8X2 491 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF71Q9NQZ8 489 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 GPR83Q9NYM4 423 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 TMEM216Q9P0N5 145 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 C19orf25Q9UFG5 118 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 TP53TG5Q9Y2B4 290 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 TSC22D4Q9Y3Q8 395 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF451Q9Y4E5 1061 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 HEMK1Q9Y5R4 338 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 V9GYY5 206 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-211ENST00000557623 CACNA1GO43497 2377 aa11.8□□□□□ -0.52
SLIRP-211ENST00000557623 LOC102723996A0A087X1L8 192 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 A0A1W2PQ72 361 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF860A6NHJ4 632 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 LRRC14BA6NHZ5 514 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 A6NL46 340 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 SMIM23A6NLE4 172 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 GOLGA8RI6L899 631 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 PSMD12O00232 456 aaPredicted RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ERI3O43414 337 aaKnown RBP11.79□□□□□ -0.52
SLIRP-211ENST00000557623 CHST10O43529 356 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 GLRA3O75311 464 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 CLDN9O95484 217 aa11.79□□□□□ -0.52
SLIRP-211ENST00000557623 ALPPP05187 535 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms