RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 PTGFRNQ9P2B2 879 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 NARFQ9UHQ1 456 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 CTNNA3Q9UI47 895 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 PCDHA7Q9UN72 937 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 IL16Q14005 1332 aa2.86□□□□□ -1.95
TRAV28-201ENST00000557548 IGLV5-45A0A087WSX0 123 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 TRBV5-5A0A0J9YX44 114 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 PROB1E7EW31 1015 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CLDN3O15551 220 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 RIPK2O43353 540 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 GRID2O43424 1007 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 KIF5CO60282 957 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CLN5O75503 358 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 IGHV4-39P01824 125 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 NR3C1P04150 777 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ATP1B1P05026 303 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 SFTPBP07988 381 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ACAA1P09110 424 aaPredicted RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ODC1P11926 461 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 FCGR1AP12314 374 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 GP1BBP13224 206 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 EFNA1P20827 205 aaPredicted RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CYP2F1P24903 491 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 HLA-FP30511 346 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 SOX6P35712 828 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 TNFRSF4P43489 277 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ABCG1P45844 678 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CCL11P51671 97 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 LBX1P52954 281 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 NANOS3P60323 173 aaKnown RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 HERV-K104P63124 156 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 PDZK1IP1Q13113 114 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 RBM39Q14498 530 aaKnown RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 KIF19Q2TAC6 998 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CMPK2Q5EBM0 449 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 SLC25A53Q5H9E4 307 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 C20orf194Q5TEA3 1177 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 NKAIN2Q5VXU1 208 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 SULT1C3Q6IMI6 304 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF549Q6P9A3 640 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ARSKQ6UWY0 536 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 C17orf107Q6ZR85 190 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CREB3L2Q70SY1 520 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 BNIPLQ7Z465 357 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 COX8CQ7Z4L0 72 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CUZD1Q86UP6 607 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 UNC5CLQ8IV45 518 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 RCOR2Q8IZ40 523 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 PELI3Q8N2H9 469 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 GBP7Q8N8V2 638 aaPredicted RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF383Q8NA42 475 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 RNF149Q8NC42 400 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 KBTBD8Q8NFY9 601 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 OR52B4Q8NGK2 314 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 OR13C3Q8NGS6 347 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 LNX1Q8TBB1 728 aaPredicted RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 DQX1Q8TE96 717 aaKnown RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 GLYATL1Q969I3 302 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 CXorf58Q96LI9 332 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 NEDD4LQ96PU5 975 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 MTIF3Q9H2K0 278 aaKnown RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 RIBC2Q9H4K1 309 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 FKRPQ9H9S5 495 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ACOXLQ9NUZ1 547 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 MIS18AQ9NYP9 233 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF624Q9P2J8 865 aaPredicted RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 RABL2AQ9UBK7 228 aaPredicted RBP2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ENTPD4Q9Y227 616 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 KIF3AQ9Y496 699 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 ETV7Q9Y603 341 aa2.85□□□□□ -1.95
TRAV28-201ENST00000557548 IGHV4OR15-8A0A075B7B6 117 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 A0A1B0GWJ7 208 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 DENND3A2RUS2 1198 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 CLEC18AA5D8T8 446 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 ERICH4A6NGS2 130 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 ZNF732B4DXR9 585 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 GPR89AB7ZAQ6 455 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 EEF2KO00418 725 aaKnown RBP2.84□□□□□ -1.95
TRAV28-201ENST00000557548 IKBKBO14920 756 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 MCF2LO15068 1137 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 ANGPT2O15123 496 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 OGTO15294 1046 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 CHADO15335 359 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 MLNRO43193 412 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 SYT7O43581 403 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 PRAMEF12O95522 483 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 KRT6BP04259 564 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 PCCBP05166 539 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 YES1P07947 543 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 GPR89BP0CG08 455 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 KRT3P12035 628 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 CEACAM1P13688 526 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 GNSP15586 552 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 RPS2P15880 293 aaKnown RBP2.84□□□□□ -1.95
TRAV28-201ENST00000557548 CYP3A5P20815 502 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 RBMS1P29558 406 aaKnown RBP2.84□□□□□ -1.95
TRAV28-201ENST00000557548 STIP1P31948 543 aaKnown RBP2.84□□□□□ -1.95
TRAV28-201ENST00000557548 OR1D2P34982 312 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 MAGEA11P43364 429 aa2.84□□□□□ -1.95
TRAV28-201ENST00000557548 KRT6CP48668 564 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms