RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CHP1Q99653 195 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ZFYVE21Q9BQ24 234 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 VKORC1Q9BQB6 163 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 TUBB6Q9BUF5 446 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 RAB11FIP5Q9BXF6 653 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 VN1R1Q9GZP7 353 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ZFP64Q9NPA5 681 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 MKKSQ9NPJ1 570 aaPredicted RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 GPRC5BQ9NZH0 403 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 TNFRSF10DQ9UBN6 386 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 RUVBL2Q9Y230 463 aaKnown RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 RUVBL1Q9Y265 456 aaKnown RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 ALG6Q9Y672 507 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 AKAP6Q13023 2319 aa5.52□□□□□ -1.53
VPS33B-207ENST00000557470 PRRC2AP48634 2157 aaKnown RBP5.52□□□□□ -1.53
VPS33B-207ENST00000557470 A0A087WV62 115 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 A0A0A6YYC8 382 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 A0A0U1RQJ8 604 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 A0A1B0GTL3 188 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 I3L1I5 382 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 PJA2O43164 708 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 PRPF4O43172 522 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 FOXS1O43638 330 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ASNA1O43681 348 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 TIPRLO75663 272 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 TUSC2O75896 110 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SMNDC1O75940 238 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SLCO2B1O94956 709 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 C1orf105O95561 183 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 TSPAN12O95859 305 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 MBD3O95983 291 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 GOT2P00505 430 aaKnown RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 APOA4P06727 396 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ANXA5P08758 320 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 C8orf89P0DMQ9 161 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 AOAHP28039 575 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 EEF1DP29692 281 aaKnown RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 PRIM2P49643 509 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 MAT1AQ00266 395 aaKnown RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 GUCY1A3Q02108 690 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 TFF3Q07654 80 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 MAP4K2Q12851 820 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 FASTKQ14296 549 aaKnown RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SEMA3AQ14563 771 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 BTBD16Q32M84 506 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 PLAG1Q6DJT9 500 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SPINK14Q6IE38 97 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 H3F3CQ6NXT2 135 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 FBXO42Q6P3S6 717 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ABHD17CQ6PCB6 329 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 POMZP3Q6PJE2 187 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 AFTPHQ6ULP2 937 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 LANCL3Q6ZV70 420 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 TMEM200AQ86VY9 491 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 CRLF3Q8IUI8 442 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SHISA5Q8N114 240 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 KRT222Q8N1A0 295 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 KRT78Q8N1N4 520 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 GHDCQ8N2G8 530 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 MARVELD2Q8N4S9 558 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ARHGEF39Q8N4T4 335 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 CSNK1A1LQ8N752 337 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 OR8K1Q8NGG5 319 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 HMGCLL1Q8TB92 370 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SKA2Q8WVK7 121 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ASZ1Q8WWH4 475 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 HDAC10Q969S8 669 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 LRRC45Q96CN5 670 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 MVB12AQ96EY5 273 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SCMH1Q96GD3 660 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 PLPPR2Q96GM1 343 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 GBP4Q96PP9 640 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ALS2CR12Q96Q35 445 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 NPAS2Q99743 824 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 PAIP2Q9BPZ3 127 aaKnown RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 FERMT1Q9BQL6 677 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 UTP23Q9BRU9 249 aaKnown RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 DPH7Q9BTV6 452 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ACAT2Q9BWD1 397 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 DRC3Q9H069 523 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 LRRC40Q9H9A6 602 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 NHEJ1Q9H9Q4 299 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 IFNKQ9P0W0 207 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 SLC2A6Q9UGQ3 507 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 TTC7AQ9ULT0 858 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 CDC14AQ9UNH5 594 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 R3HDM2Q9Y2K5 976 aaKnown RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 TRAF6Q9Y4K3 522 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ASB1Q9Y576 335 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 NFS1Q9Y697 457 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 NSD1Q96L73 2696 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 ABCA4P78363 2273 aa5.51□□□□□ -1.53
VPS33B-207ENST00000557470 HRNRQ86YZ3 2850 aaPredicted RBP5.51□□□□□ -1.53
VPS33B-207ENST00000557470 VPS13CQ709C8 3753 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 IGKV1-8A0A0C4DH67 115 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 NKX2-6A6NCS4 301 aa5.5□□□□□ -1.53
VPS33B-207ENST00000557470 OR2W5A6NFC9 320 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms