RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 CRB3Q9BUF7 120 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 C1QTNF3Q9BXJ4 246 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 REXO4Q9GZR2 422 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 AICDAQ9GZX7 198 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 RHBGQ9H310 441 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 C12orf65Q9H3J6 166 aaKnown RBP10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 CENPHQ9H3R5 247 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 KLHL31Q9H511 634 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ZBTB26Q9HCK0 441 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 ACSS2Q9NR19 701 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 C14orf105Q9NVL8 296 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 MKS1Q9NXB0 559 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 RNF11Q9Y3C5 154 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 PCDHGA11Q9Y5H2 935 aa10.03□□□□□ -0.8
HNRNPC-232ENST00000557442 SPTA1P02549 2419 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 A0A0G2JN53 185 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 LRIT2A6NDA9 550 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 VSTM2BA6NLU5 285 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 G3V2L1 256 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 ERVH48-1M5A8F1 160 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 SPAG7O75391 227 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 OTCP00480 354 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 CCR10P46092 362 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 XCR1P46094 333 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 PRKAA2P54646 552 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 CLCQ05315 142 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 ATP1A4Q13733 1029 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 SSPNQ14714 243 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 MFSD4BQ5TF39 518 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 PPP1R32Q7Z5V6 425 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 ZC3H7AQ8IWR0 971 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 IQCKQ8N0W5 287 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 BANPQ8N9N5 519 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 L3MBTL4Q8NA19 623 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 OR2L5Q8NG80 312 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 OR5T3Q8NGG3 340 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 OR51Q1Q8NH59 317 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 HUS1BQ8NHY5 278 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 TRPC4APQ8TEL6 797 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 ZNF473Q8WTR7 871 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 MS4A6EQ96DS6 147 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 L3HYPDHQ96EM0 354 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 FAR2Q96K12 515 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 UBL7Q96S82 380 aaPredicted RBP10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 MTERF1Q99551 399 aaKnown RBP10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 MS4A8Q9BY19 250 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 RBCK1Q9BYM8 510 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 COPS7BQ9H9Q2 264 aaPredicted RBP10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 DMRT3Q9NQL9 472 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 SENP1Q9P0U3 644 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 MID2Q9UJV3 735 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 C3orf18Q9UK00 162 aa10.02□□□□□ -0.81
HNRNPC-232ENST00000557442 CNTRLQ7Z7A1 2325 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 A0A088AWK7 358 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 ARGFXA6NJG6 315 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 IDSB3KWA1 339 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 H0YIV9 168 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 PEX12O00623 359 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 SH3BGRLO75368 114 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 JRKO75564 520 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 TBX6O95947 436 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 TGFB1P01137 390 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 IGHEP01854 428 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 FAM87AP0C7U9 286 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 CPA3P15088 417 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 IMPDH1P20839 514 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 ZNF10P21506 573 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 MMP11P24347 488 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 PLA2G16P53816 162 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 POLE2P56282 527 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 BTN3A2P78410 334 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 TGM3Q08188 693 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 CHAF1BQ13112 559 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 ZRSR2Q15696 482 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 ADPRMQ3LIE5 342 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 MINDY4Q4G0A6 757 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 GGTA1PQ4G0N0 100 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 UNC50Q53HI1 259 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 BEND6Q5SZJ8 279 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 CPZQ66K79 652 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 TTC19Q6DKK2 380 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 LETMD1Q6P1Q0 360 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 LRIG3Q6UXM1 1119 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 MILR1Q7Z6M3 343 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 CROCCP2Q86T23 111 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 LAPTM4BQ86VI4 370 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 RNF175Q8N4F7 328 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 CCNYL1Q8N7R7 359 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 ARMC2Q8NEN0 867 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 OR4F6Q8NGB9 312 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 APOBEC4Q8WW27 367 aaKnown RBP10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 CMTM7Q96FZ5 175 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 PEX11GQ96HA9 241 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 MAGEB10Q96LZ2 347 aaPredicted RBP10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 IP6K3Q96PC2 410 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 FAM111AQ96PZ2 611 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 F2RL3Q96RI0 385 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 NTMT1Q9BV86 223 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 TGIF2Q9GZN2 237 aa10.01□□□□□ -0.81
HNRNPC-232ENST00000557442 SEMA3GQ9NS98 782 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms