RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 A0A1B0GTH9 108 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 OR2AG2A6NM03 316 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 F8VZ95 297 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 H7C1Q1 480 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 DVL2O14641 736 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 ZNHIT1O43257 154 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UGT1A9O60656 530 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SRPX2O60687 465 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 RNF8O76064 485 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SUN1O94901 812 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 GOSR1O95249 250 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 POLBP06746 335 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SP1P08047 785 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SLC35G4P0C7Q5 338 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UGT2B7P16662 529 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UGT1A6P19224 532 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CD53P19397 219 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UGT1A1P22309 533 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CXCR2P25025 360 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 MIPP30301 263 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SERPINB6P35237 376 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 PCK1P35558 622 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 OR1D4P47884 311 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 ZFP36L2P47974 494 aaKnown RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 EMP2P54851 167 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF33BQ06732 778 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 AP1B1Q10567 949 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 MAMLD1Q13495 774 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 PCBP2Q15366 365 aaKnown RBP eCLIP4.43□□□□□ -1.71e-6■■■□□ 18.2
SCFD1-223ENST00000557076 SYCP1Q15431 976 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 OR1C1Q15619 314 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 DPYSL2Q16555 572 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 DEFB110Q30KQ9 67 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SLC25A35Q3KQZ1 300 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 TCTE1Q5JU00 501 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 FNBP1LQ5T0N5 605 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 RNF187Q5TA31 235 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 HECTD2Q5U5R9 776 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SPINK14Q6IE38 97 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 ACAD10Q6JQN1 1059 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SLC25A25Q6KCM7 469 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 PRMT9Q6P2P2 845 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 DNAJC24Q6P3W2 148 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CNSTQ6PJW8 725 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 KDELC1Q6UW63 502 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CYP4V2Q6ZWL3 525 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 MON1BQ7L1V2 547 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CXorf67Q86X51 503 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 TMTC1Q8IUR5 882 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 LRRC75A-AS1Q8N1F1 130 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 FAM98AQ8NCA5 519 aaKnown RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 OR52E1Q8NGJ3 308 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 FLVCR1-AS1Q8TAF5 88 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 RBM41Q96IZ5 413 aaKnown RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 RMDN2Q96LZ7 410 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF285Q96NJ3 590 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CLUHP3Q96NS8 147 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 MCEEQ96PE7 176 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 SIGLEC12Q96PQ1 595 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CSPG4P5Q96PW8 444 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 TRIB3Q96RU7 358 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 PEBP4Q96S96 227 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 NRTNQ99748 197 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 PIP5K1AQ99755 562 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UTP23Q9BRU9 249 aaKnown RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 PITHD1Q9GZP4 211 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UGT1A7Q9HAW7 530 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UGT1A10Q9HAW8 530 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 UGT1A8Q9HAW9 530 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 NLRC4Q9NPP4 1024 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 CUTCQ9NTM9 273 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 IRAK4Q9NWZ3 460 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 ALG6Q9Y672 507 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 PCM1Q15154 2024 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 TGP01266 2768 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ABCA1O95477 2261 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 A0A0A6YYJ9 748 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 A8MUI8 341 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 IFRD1O00458 451 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-223ENST00000557076 CLDN4O14493 209 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 RASGRF2O14827 1237 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 SGTAO43765 313 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 NEURL1O76050 574 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 GFPT2O94808 682 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 SCAF4O95104 1147 aaKnown RBP4.42□□□□□ -1.7
SCFD1-223ENST00000557076 MT-CYBP00156 380 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-223ENST00000557076 UQCRHP07919 91 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 CELA2AP08217 269 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 CHRM5P08912 532 aaPredicted RBP4.42□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF24P17028 368 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 HK1P19367 917 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 PSMA2P25787 234 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 PTGER1P34995 402 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 NUP107P57740 925 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 DCAF7P61962 342 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 HSF1Q00613 529 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 RUNX1T1Q06455 604 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 GALNT2Q10471 571 aa4.42□□□□□ -1.7
SCFD1-223ENST00000557076 RPA4Q13156 261 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms