RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 FAM129AQ9BZQ8 928 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 RHBGQ9H310 441 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 EXO5Q9H790 373 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 NEUROD4Q9HD90 331 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 TREX1Q9NSU2 369 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 DEPPQ9NTK1 212 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 HPF1Q9NWY4 346 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 LIPGQ9Y5X9 500 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 PINLYPA6NC86 204 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 GALR3O60755 368 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-219ENST00000556432 MYO1DO94832 1006 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 ATE1O95260 518 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 B3GALT4O96024 378 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 IMPA1P29218 277 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 CLCN2P51788 898 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 C1orf185Q5T7R7 199 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 CES3Q6UWW8 571 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 QSOX2Q6ZRP7 698 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 RGS9BPQ6ZS82 235 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 LRRC56Q8IYG6 542 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-219ENST00000556432 UBL4BQ8N7F7 174 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 PRELID2Q8N945 189 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 ZNF740Q8NDX6 193 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 OR2M7Q8NG81 312 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 FAM222BQ8WU58 562 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 SREK1Q8WXA9 508 aaKnown RBP12.97□□□□□ -0.33
ACTN1-219ENST00000556432 ASB15Q8WXK1 588 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 TM4SF19Q96DZ7 209 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 ARSGQ96EG1 525 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 LRRC46Q96FV0 321 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 CCDC77Q9BR77 488 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 SARGQ9BW04 601 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 TTTY12Q9BZ98 90 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 PCBD2Q9H0N5 130 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 LDAHQ9H6V9 325 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 B4GALT7Q9UBV7 327 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 CBLCQ9ULV8 474 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 SH2B3Q9UQQ2 575 aa12.97□□□□□ -0.33
ACTN1-219ENST00000556432 DRG1Q9Y295 367 aaKnown RBP12.97□□□□□ -0.33
ACTN1-219ENST00000556432 A0A0G2JMM0 328 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 A0A1W2PPB8 328 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 A0A1W2PRS3 328 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 TCRBV7S2A1N4TA0A589 114 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 KIR3DP1A8MWS1 328 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 LCMT2O60294 686 aaKnown RBP12.96□□□□□ -0.33
ACTN1-219ENST00000556432 CEP104O60308 925 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 WDR1O75083 606 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 DNAJB6O75190 326 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 CDH1P12830 882 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 ALOX12P18054 663 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 STIP1P31948 543 aaKnown RBP12.96□□□□□ -0.33
ACTN1-219ENST00000556432 RPS6KA1Q15418 735 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 WLSQ5T9L3 541 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 RTL6Q6ICC9 239 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 GK5Q6ZS86 529 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 CHSY3Q70JA7 882 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 UBE2R2Q712K3 238 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-219ENST00000556432 PRUNE1Q86TP1 453 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 CCDC89Q8N998 374 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 NFAM1Q8NET5 270 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-219ENST00000556432 B3GNT7Q8NFL0 401 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 ASB11Q8WXH4 323 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 IL22Q9GZX6 179 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 ZDHHC11Q9H8X9 412 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 PRDM9Q9NQV7 894 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 PNO1Q9NRX1 252 aaKnown RBP12.96□□□□□ -0.33
ACTN1-219ENST00000556432 BFARQ9NZS9 450 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 SAMD15Q9P1V8 674 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 ZNF148Q9UQR1 794 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 COL6A5A8TX70 2615 aa12.96□□□□□ -0.33
ACTN1-219ENST00000556432 STAB1Q9NY15 2570 aa12.96□□□□□ -0.34
ACTN1-219ENST00000556432 RTTNQ86VV8 2226 aa12.96□□□□□ -0.34
ACTN1-219ENST00000556432 ATP6AP2A0A1C7CYW4 349 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 TCRBV16S1A1N1A0A5B0 115 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 OR1F1O43749 312 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 ATP6AP2O75787 350 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 OR2J2O76002 312 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 ZNF888P0CJ79 500 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 RNH1P13489 461 aaKnown RBP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 ETS1P14921 441 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 TACR1P25103 407 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 ARNTP27540 789 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 HOXC12P31275 282 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 CYLC1P35663 651 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 MAGEA5P43359 124 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 MAN2A2P49641 1150 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 RGS1Q08116 209 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 KLF1Q13351 362 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 PCBP2Q15366 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 NDUFAF5Q5TEU4 345 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 HECTD2Q5U5R9 776 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 NIPAL1Q6NVV3 410 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 IL20RBQ6UXL0 311 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 C16orf47Q6ZP98 133 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-219ENST00000556432 TRILQ7L0X0 811 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 ABHD13Q7L211 337 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 PEX26Q7Z412 305 aa12.95□□□□□ -0.34
ACTN1-219ENST00000556432 SPNS2Q8IVW8 549 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms