RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PCNAP12004 261 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 COX6A1P12074 109 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 IL10P22301 178 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 MYBPC3Q14896 1274 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 VWA5B1Q5TIE3 1220 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 GRHL2Q6ISB3 625 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 METTL2BQ6P1Q9 378 aaKnown RBP14.34□□□□□ -0.11
ACTN1-217ENST00000556203 TMEM205Q6UW68 189 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 PARP9Q8IXQ6 854 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 MZB1Q8WU39 189 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 METTL21AQ8WXB1 218 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 TBC1D20Q96BZ9 403 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 FAR2Q96K12 515 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 OR1F2PQ96R84 312 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 SMAD5Q99717 465 aaKnown RBP14.34□□□□□ -0.11
ACTN1-217ENST00000556203 REXO4Q9GZR2 422 aaKnown RBP14.34□□□□□ -0.11
ACTN1-217ENST00000556203 IPPKQ9H8X2 491 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 ACTR8Q9H981 624 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 ZNF160Q9HCG1 818 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 ZNF451Q9Y4E5 1061 aa14.34□□□□□ -0.11
ACTN1-217ENST00000556203 LOC102723996A0A087X1L8 192 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 IGHV1-45A0A0A0MS14 117 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 NSG1A0A0A6YYJ2 146 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 PCDH17O14917 1159 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 SUV39H1O43463 412 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 SLC28A2O43868 658 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 FHP07954 510 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 CYC1P08574 325 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 SBK3P0C264 359 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 PYGBP11216 843 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 HPDP32754 393 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-217ENST00000556203 HSD17B3P37058 310 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 PIK3CGP48736 1102 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 PLA2G16P53816 162 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 SOX8P57073 446 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 KLRB1Q12918 225 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 ADPRMQ3LIE5 342 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 COLEC12Q5KU26 742 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 NDUFAF7Q7L592 441 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 LAS2Q8IYD9 372 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 CNPY4Q8N129 248 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 TMEM151AQ8N4L1 468 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 TEX19Q8NA77 164 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 ACMSDQ8TDX5 336 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 EPS8L3Q8TE67 593 aaKnown RBP14.33□□□□□ -0.12
ACTN1-217ENST00000556203 ZNF473Q8WTR7 871 aaKnown RBP14.33□□□□□ -0.12
ACTN1-217ENST00000556203 ZNF552Q9H707 407 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-217ENST00000556203 NOL11Q9H8H0 719 aaKnown RBP14.33□□□□□ -0.12
ACTN1-217ENST00000556203 PPCSQ9HAB8 311 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 CLK4Q9HAZ1 481 aaKnown RBP14.33□□□□□ -0.12
ACTN1-217ENST00000556203 LANCL2Q9NS86 450 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 TMEM216Q9P0N5 145 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 PCDHGB7Q9Y5F8 929 aa14.33□□□□□ -0.12
ACTN1-217ENST00000556203 A0A1W2PPM1 405 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 A0A1W2PQ72 361 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 UGDHO60701 494 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 B4GALT2O60909 372 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 ALPPP05187 535 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 JAK1P23458 1154 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 SERPINB1P30740 379 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 ARL1P40616 181 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-217ENST00000556203 RHAGQ02094 409 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 Q0VFX4 171 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 PCOLCEQ15113 449 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 IRAK1BP1Q5VVH5 260 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 LIPJQ5W064 366 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 WDR93Q6P2C0 686 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 TRIM40Q6P9F5 258 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 ATG14Q6ZNE5 492 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 LANCL3Q6ZV70 420 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 LCA5Q86VQ0 697 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 TDRPQ86YL5 185 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 CYP4X1Q8N118 509 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 CA13Q8N1Q1 262 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 OR2L5Q8NG80 312 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 OR7G3Q8NG95 312 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 AENQ8WTP8 325 aaKnown RBP14.32□□□□□ -0.12
ACTN1-217ENST00000556203 ATP6V1E2Q96A05 226 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 THOC3Q96J01 351 aaKnown RBP14.32□□□□□ -0.12
ACTN1-217ENST00000556203 NSUN5Q96P11 429 aaKnown RBP14.32□□□□□ -0.12
ACTN1-217ENST00000556203 QRFPRQ96P65 431 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 F2RL3Q96RI0 385 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 ZNF700Q9H0M5 742 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 RIC8BQ9NVN3 520 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 C19orf25Q9UFG5 118 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-217ENST00000556203 ANAPC2Q9UJX6 822 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 PCTPQ9UKL6 214 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 CCDC88CQ9P219 2028 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 BSNQ9UPA5 3926 aa14.32□□□□□ -0.12
ACTN1-217ENST00000556203 A0A088AWK7 358 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 IGHV3-20A0A0C4DH32 117 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 A8MT66 165 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 FOXO6A8MYZ6 492 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 PSMD12O00232 456 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-217ENST00000556203 OR7A17O14581 309 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 B3GALT2O43825 422 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 KLHL41O60662 606 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 SH3BGRLO75368 114 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 TGFB1P01137 390 aa14.31□□□□□ -0.12
ACTN1-217ENST00000556203 RPS17P08708 135 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms