RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 MBOAT1Q6ZNC8 495 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 ZC3HC1Q86WB0 502 aaKnown RBP7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 CREG2Q8IUH2 290 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 KRT78Q8N1N4 520 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 GHDCQ8N2G8 530 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 TCAIMQ8N3R3 496 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 ANKRD53Q8N9V6 530 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 NFAM1Q8NET5 270 aaPredicted RBP7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 C16orf52Q8NHV5 167 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 ZCCHC10Q8TBK6 192 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 PHF10Q8WUB8 498 aaKnown RBP7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 TMEM125Q96AQ2 219 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 CCDC120Q96HB5 630 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 SIGLEC12Q96PQ1 595 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 NPAS2Q99743 824 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 RHOJQ9H4E5 214 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 EHD1Q9H4M9 534 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 GPAMQ9HCL2 828 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 ZFATQ9P243 1243 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 SH2B3Q9UQQ2 575 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 SLC22A14Q9Y267 594 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 OARD1Q9Y530 152 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 CENPEQ02224 2701 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 PCNX1Q96RV3 2341 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 MYO9AB2RTY4 2548 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 CPAMD8Q8IZJ3 1885 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 GTF3C1Q12789 2109 aa7.3□□□□□ -1.24
PTCSC3-201ENST00000556013 CRYBG3Q68DQ2 2970 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 LRIT2A6NDA9 550 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 OR2W5A6NFC9 320 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 E9PLN8 166 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 FCHO1O14526 889 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 EIF3HO15372 352 aaKnown RBP eCLIP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 NME2P1O60361 137 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 SEC31AO94979 1220 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 GUCA1CO95843 209 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 F10P00742 488 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 ZNF888P0CJ79 500 aaPredicted RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 NME2P22392 152 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 ELAVL4P26378 380 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 HTR1EP28566 365 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 TNFRSF8P28908 595 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 SLC6A12P48065 614 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 HLCSP50747 726 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 GPR143P51810 404 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 ITGA8P53708 1063 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 DR1Q01658 176 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 OC90Q02509 493 aaPredicted RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 SRSF11Q05519 484 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 PCDH1Q08174 1060 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 RBBP5Q15291 538 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 KCTD19Q17RG1 926 aaPredicted RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 ADPRMQ3LIE5 342 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 TRMT10BQ6PF06 316 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 TMIGD1Q6UXZ0 262 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 SLCO4C1Q6ZQN7 724 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 GALNTL5Q7Z4T8 443 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 SIAH3Q8IW03 269 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 GPALPP1Q8IXQ4 340 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 ZNF595Q8IYB9 648 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 SRFBP1Q8NEF9 429 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 B3GNT7Q8NFL0 401 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 OR5T3Q8NGG3 340 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 CDKL2Q92772 493 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 TSLPQ969D9 159 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 GAL3ST3Q96A11 431 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 RHBDF1Q96CC6 855 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 FAR2Q96K12 515 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 FRMD6Q96NE9 622 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 VKORC1Q9BQB6 163 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 MCMBPQ9BTE3 642 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 DEFB126Q9BYW3 111 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 DERL2Q9GZP9 239 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 CNOT10Q9H9A5 744 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 CTNNAL1Q9UBT7 734 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 MRPS33Q9Y291 106 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 KLF13Q9Y2Y9 288 aaPredicted RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 YARS2Q9Y2Z4 477 aaKnown RBP7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 SAR1BQ9Y6B6 198 aa7.29□□□□□ -1.24
PTCSC3-201ENST00000556013 PKDREJQ9NTG1 2253 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 FAM95CA0A1B0GW59 222 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 CCDC189A1A4V9 331 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 ANKDD1BA6NHY2 528 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 PRRG2O14669 202 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 TP73O15350 636 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 B4GALT2O60909 372 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 CTNSO60931 367 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 DNAJB6O75190 326 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 SLC25A12O75746 678 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 CDC123O75794 336 aaPredicted RBP7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 ZFAND5O76080 213 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 WISP3O95389 354 aaPredicted RBP7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 CLDN14O95500 239 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 STATHP02808 62 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 SERPIND1P05546 499 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 GSTA2P09210 222 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 TFEBP19484 476 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 CAPN3P20807 821 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 CASP2P42575 452 aa7.28□□□□□ -1.24
PTCSC3-201ENST00000556013 ARFIP1P53367 373 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms