RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PCDH7O60245 1069 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 OR2B3O76000 313 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ALDOCP09972 364 aaKnown RBP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ZNF888P0CJ79 500 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 PRPS2P11908 318 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 FOLR1P15328 257 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 CSRP1P21291 193 aaKnown RBP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 TIA1P31483 386 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 SSR2P43308 183 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 TSFMP43897 325 aaKnown RBP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 GABRA4P48169 554 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ATP4BP51164 291 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 PLA2G16P53816 162 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 DIO3P55073 304 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ITGA1P56199 1179 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 SKP1P63208 163 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 INSM1Q01101 510 aaPredicted RBP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 HYAL2Q12891 473 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 SQLEQ14534 574 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 GRM7Q14831 915 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 HERC3Q15034 1050 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 KIAA0040Q15053 153 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 GPR19Q15760 415 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 HKDC1Q2TB90 917 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 OR4C11Q6IEV9 310 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 TMEM214Q6NUQ4 689 aaKnown RBP10.5□□□□□ -0.73
TMEM260-208ENST00000555905 CYP20A1Q6UW02 462 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 NUDT13Q86X67 352 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 MIER2Q8N344 545 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 KCT2Q8NC54 265 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 AGBL5Q8NDL9 886 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ZCCHC10Q8TBK6 192 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 MARK4Q96L34 752 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 FCRL1Q96LA6 429 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ZNF285Q96NJ3 590 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 NMUR2Q9GZQ4 415 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 SAR1AQ9NR31 198 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 FGF21Q9NSA1 209 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 STARD5Q9NSY2 213 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 AIG1Q9NVV5 245 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 SIRT5Q9NXA8 310 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ADAM29Q9UKF5 820 aa10.5□□□□□ -0.73
TMEM260-208ENST00000555905 ZNF292O60281 2723 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 HYKKA2RU49 373 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 RRP9O43818 475 aaKnown RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 KLK1P06870 262 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 ANXA4P09525 319 aaPredicted RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 BCKDHAP12694 445 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 ALOX12P18054 663 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 CCKBRP32239 447 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 BSGP35613 385 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 RAB8AP61006 207 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 BTN3A2P78410 334 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 FOXM1Q08050 763 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 PRTGQ2VWP7 1150 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 FAM214AQ32MH5 1076 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 CCNYL2Q5T2Q4 361 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 GARNL3Q5VVW2 1013 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 NIPAL1Q6NVV3 410 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 GALNT18Q6P9A2 607 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 TLDC1Q6P9B6 456 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 ABHD17CQ6PCB6 329 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 UBE3DQ7Z6J8 389 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 B3GNT8Q7Z7M8 397 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 BPHLQ86WA6 291 aaPredicted RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 LIX1Q8N485 282 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 CPSF7Q8N684 471 aaKnown RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 OR8K5Q8NH50 307 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 UTP15Q8TED0 518 aaKnown RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 RNF166Q96A37 237 aaPredicted RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 DEPDC7Q96QD5 511 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 SORBS1Q9BX66 1292 aaKnown RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 EBPLQ9BY08 206 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 BRINP2Q9C0B6 783 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 SPRTNQ9H040 489 aaPredicted RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 TOR4AQ9NXH8 423 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 RAPGEFL1Q9UHV5 662 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 MCM8Q9UJA3 840 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 CDV3Q9UKY7 258 aaKnown RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 DLGAP4Q9Y2H0 992 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 GPR45Q9Y5Y3 372 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 COPG1Q9Y678 874 aaKnown RBP10.49□□□□□ -0.73
TMEM260-208ENST00000555905 SLC22A7Q9Y694 548 aa10.49□□□□□ -0.73
TMEM260-208ENST00000555905 PCNX2A6NKB5 2137 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 A0A0G2JN53 185 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 FITM1A5D6W6 292 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 EFCAB7A8K855 629 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 PSMD12O00232 456 aaPredicted RBP10.48□□□□□ -0.73
TMEM260-208ENST00000555905 RTCAO00442 366 aaKnown RBP10.48□□□□□ -0.73
TMEM260-208ENST00000555905 SLC22A2O15244 555 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 B3GALT2O43825 422 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 EEDO75530 441 aaKnown RBP10.48□□□□□ -0.73
TMEM260-208ENST00000555905 MT-CO3P00414 261 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 GBAP04062 536 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 FTH1P19P0C7X4 201 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 G6PDP11413 515 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 CEACAM1P13688 526 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 SDC1P18827 310 aa10.48□□□□□ -0.73
TMEM260-208ENST00000555905 HIST1H1TP22492 207 aaPredicted RBP10.48□□□□□ -0.73
TMEM260-208ENST00000555905 ATP5A1P25705 553 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms