RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 EFCAB7A8K855 629 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 PSMD12O00232 456 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 SAP18O00422 153 aaKnown RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 PLPP1O14494 284 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 SLC22A2O15244 555 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 LCMT2O60294 686 aaKnown RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 NRP2O60462 931 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 SH3BGRLO75368 114 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ANXA4P09525 319 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 PIM1P11309 404 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 TLX1P31314 330 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 HNRNPH1P31943 449 aaKnown RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ATP4BP51164 291 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 INSM1Q01101 510 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 CFHR1Q03591 330 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 KCNAB1Q14722 419 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ZIC1Q15915 447 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 DPY19L1Q2PZI1 675 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 HKDC1Q2TB90 917 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ADPRMQ3LIE5 342 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 OR4C11Q6IEV9 310 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ADNP2Q6IQ32 1131 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 NOXRED1Q6NXP6 359 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 FBXO42Q6P3S6 717 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 DHRS13Q6UX07 377 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 LARP4Q71RC2 724 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 MAVSQ7Z434 540 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 VN1R4Q7Z5H5 301 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 R3HCC1LQ7Z5L2 792 aaKnown RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 METTL4Q8N3J2 472 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 TMEM132CQ8N3T6 1108 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 LIX1Q8N485 282 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 EFCAB3Q8N7B9 438 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 OR2T11Q8NH01 316 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 CREB3L4Q8TEY5 395 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 TM4SF19Q96DZ7 209 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 LIN37Q96GY3 246 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 PRR11Q96HE9 360 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 C3orf30Q96M34 536 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 CATSPER2Q96P56 530 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 FCRL4Q96PJ5 515 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 OR52B2Q96RD2 323 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 F2RL3Q96RI0 385 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 PHOX2BQ99453 314 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ZPBPQ9BS86 351 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 RTKNQ9BST9 563 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 EBPLQ9BY08 206 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ASPSCR1Q9BZE9 553 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 DPY30Q9C005 99 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 FAM60AQ9NP50 221 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 MIEF1Q9NQG6 463 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 ATAD3AQ9NVI7 634 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 AIG1Q9NVV5 245 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 MS4A12Q9NXJ0 267 aa10.66□□□□□ -0.7
SHMT2-220ENST00000555634 WBP11Q9Y2W2 641 aaKnown RBP10.66□□□□□ -0.7
SHMT2-220ENST00000555634 SCN3AQ9NY46 2000 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 LOC105369274A0A096LPK9 316 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 LOC102723532A0A0G2JNH3 316 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 SPAARA0A1B0GVQ0 90 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 A0A1B0GX78 115 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 B4E171 279 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ZNF195O14628 629 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 P2RX6O15547 441 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 PRMT3O60678 531 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 CPNE3O75131 537 aaKnown RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 SCRG1O75711 98 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 MT-CO3P00414 261 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 STATHP02808 62 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 KLK1P06870 262 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 PRR35P0CG20 571 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 PRPS1L1P21108 318 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 HIST1H1TP22492 207 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ADSLP30566 484 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 TSPAN7P41732 249 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 KCNK10P57789 538 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 RAB8AP61006 207 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 TRA2BP62995 288 aaKnown RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 BTN3A2P78410 334 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ZFP36L1Q07352 338 aaKnown RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 FAM53BQ14153 422 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 HEPACAMQ14CZ8 416 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ISXQ2M1V0 245 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 DEFB134Q4QY38 66 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 DCAF12Q5T6F0 453 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 IL23RQ5VWK5 629 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 TMEM214Q6NUQ4 689 aaKnown RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 PRMT9Q6P2P2 845 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ZNF574Q6ZN55 896 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ATG14Q6ZNE5 492 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 RAB11FIP2Q7L804 512 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 VN1R5Q7Z5H4 357 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 TMPRSS12Q86WS5 348 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 OR4N4Q8N0Y3 316 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 ZCCHC7Q8N3Z6 543 aaKnown RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 RNF175Q8N4F7 328 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 KCT2Q8NC54 265 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 GLB1L3Q8NCI6 653 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-220ENST00000555634 PROKR1Q8TCW9 393 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 CLIP3Q96DZ5 547 aa10.65□□□□□ -0.7
SHMT2-220ENST00000555634 APIPQ96GX9 242 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms