RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CHTF18Q8WVB6 975 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 SLC13A3Q8WWT9 602 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 UCN3Q969E3 161 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 CDC6Q99741 560 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 CTRCQ99895 268 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 BRINP2Q9C0B6 783 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 REXO4Q9GZR2 422 aaKnown RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 SDR39U1Q9NRG7 319 aaPredicted RBP10.25□□□□□ -0.77
TDP1-211ENST00000555178 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
TDP1-211ENST00000555178 DCDC2BA2VCK2 349 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 NPIPB8E9PQR5 432 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 PSMD12O00232 456 aaPredicted RBP10.24□□□□□ -0.77
TDP1-211ENST00000555178 CLEC3AO75596 197 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 KLK1P06870 262 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 IDO1P14902 403 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 ITIH1P19827 911 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 HRH2P25021 359 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 AHRP35869 848 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 ETV5P41161 510 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 RAB8AP61006 207 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 PHEXP78562 749 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 HSD11B2P80365 405 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 TOR1AIP1Q5JTV8 583 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 WASHC2DQ5SRD0 308 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 DEPDC1Q5TB30 811 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 CDCP2Q5VXM1 449 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 ZNF793Q6ZN11 406 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 ASPGQ86U10 573 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 SNX32Q86XE0 403 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 MIER2Q8N344 545 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 D2HGDHQ8N465 521 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 ARHGEF39Q8N4T4 335 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 PROKR1Q8TCW9 393 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 MS4A6EQ96DS6 147 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 FCRL1Q96LA6 429 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 TEFMQ96QE5 360 aaKnown RBP10.24□□□□□ -0.77
TDP1-211ENST00000555178 SERPINI1Q99574 410 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 PITHD1Q9GZP4 211 aaPredicted RBP10.24□□□□□ -0.77
TDP1-211ENST00000555178 EPB41L1Q9H4G0 881 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 ZNF768Q9H5H4 540 aaKnown RBP10.24□□□□□ -0.77
TDP1-211ENST00000555178 RUVBL1Q9Y265 456 aaKnown RBP10.24□□□□□ -0.77
TDP1-211ENST00000555178 SDK2Q58EX2 2172 aa10.24□□□□□ -0.77
TDP1-211ENST00000555178 ERI3O43414 337 aaKnown RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 PCDH7O60245 1069 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 PTX3P26022 381 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 TIA1P31483 386 aaKnown RBP eCLIP10.23□□□□□ -0.77
TDP1-211ENST00000555178 STX1BP61266 288 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 ZNF33BQ06732 778 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 BNIP1Q12981 228 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 FAM91A1Q658Y4 838 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 CCDC121Q6ZUS5 278 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 GLRX5Q86SX6 157 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 PDSS2Q86YH6 399 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 METTL4Q8N3J2 472 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 ZNF501Q96CX3 271 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 TCTN2Q96GX1 697 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 CD180Q99467 661 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 SLC6A16Q9GZN6 736 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 PDE7BQ9NP56 450 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 SIDT1Q9NXL6 827 aaKnown RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 ANKMY1Q9P2S6 941 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 EIF3LQ9Y262 564 aaKnown RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 TMEM184BQ9Y519 407 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 WASHC1A8K0Z3 465 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 TMEM150CB9EJG8 249 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 NR5A2O00482 541 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 AKAP10O43572 662 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 DKK1O94907 266 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 ZNF888P0CJ79 500 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 CAPN3P20807 821 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 TPP2P29144 1249 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 BSGP35613 385 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 RAP1GDS1P52306 607 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 FOXL2P58012 376 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 CUL3Q13618 768 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 RPS6KA2Q15349 733 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 GSTA3Q16772 222 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 RSPO4Q2I0M5 234 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 SPIN4Q56A73 249 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 C10orf62Q5T681 223 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 HES3Q5TGS1 186 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 ANKRD26P1Q6NSI1 321 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 METTL27Q8N6F8 245 aaPredicted RBP10.23□□□□□ -0.77
TDP1-211ENST00000555178 BMPERQ8N8U9 685 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 SLC38A9Q8NBW4 561 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 TTLQ8NG68 377 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 OR8K5Q8NH50 307 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 VPS33AQ96AX1 596 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 C10orf90Q96M02 699 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 DLL3Q9NYJ7 618 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 PPT2Q9UMR5 302 aa10.23□□□□□ -0.77
TDP1-211ENST00000555178 GNG14A0A1W2PPG7 69 aa10.22□□□□□ -0.77
TDP1-211ENST00000555178 ZNF860A6NHJ4 632 aa10.22□□□□□ -0.77
TDP1-211ENST00000555178 TMPRSS11DO60235 418 aa10.22□□□□□ -0.77
TDP1-211ENST00000555178 PRKRAO75569 313 aaKnown RBP10.22□□□□□ -0.77
TDP1-211ENST00000555178 ANXA4P09525 319 aaPredicted RBP10.22□□□□□ -0.77
TDP1-211ENST00000555178 COX4I1P13073 169 aa10.22□□□□□ -0.77
TDP1-211ENST00000555178 CERS1P27544 350 aa10.22□□□□□ -0.77
TDP1-211ENST00000555178 ATP4BP51164 291 aa10.22□□□□□ -0.77
TDP1-211ENST00000555178 NOVA1P51513 510 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms