RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 GGHQ92820 318 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 AZIN2Q96A70 460 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 C2orf48Q96LS8 159 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 FAM218AQ96MZ4 157 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 GAL3ST4Q96RP7 486 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 NTMT1Q9BV86 223 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 MTMR12Q9C0I1 747 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 MAN2C1Q9NTJ4 1040 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 ZCCHC3Q9NUD5 404 aaKnown RBP2.72□□□□□ -1.97
SCFD1-213ENST00000554776 NDUFA13Q9P0J0 144 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 TMEM181Q9P2C4 612 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 POLKQ9UBT6 870 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 IL36AQ9UHA7 158 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 APPL1Q9UKG1 709 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 PILRBQ9UKJ0 227 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 MAN1B1Q9UKM7 699 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 PRDM4Q9UKN5 801 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 GRID1Q9ULK0 1009 aa2.72□□□□□ -1.97
SCFD1-213ENST00000554776 TDRKHQ9Y2W6 561 aaKnown RBP2.72□□□□□ -1.97
SCFD1-213ENST00000554776 A0A1W2PR80 420 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 M0R296 226 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 NR5A2O00482 541 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 MAGEB2O15479 319 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 TEX28O15482 410 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 PSMD3O43242 534 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 B4GAT1O43505 415 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 HTATSF1O43719 755 aaKnown RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 MAGEC1O60732 1142 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 CYTIPO60759 359 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 STBD1O95210 358 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 CXCL14O95715 111 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 EML2O95834 649 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 GAS8O95995 478 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 RAF1P04049 648 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 SERPINB2P05120 415 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 RNF224P0DH78 156 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 PRKAR1AP10644 381 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 SKILP12757 684 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 RPL35AP18077 110 aaKnown RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 OR3A2P47893 321 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 CASP9P55211 416 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 DCDC1P59894 354 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 CSNK2BP67870 215 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 ARF5P84085 180 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 LCP2Q13094 533 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 TRA2AQ13595 282 aaKnown RBP eCLIP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 ITGA9Q13797 1035 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 GK2Q14410 553 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 C14orf177Q52M58 125 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 PDLIM3Q53GG5 364 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 ETFRF1Q6IPR1 90 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF790Q6PG37 636 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 BHLHB9Q6PI77 547 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 LEKR1Q6ZMV7 388 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 FCRLAQ7L513 359 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 GET4Q7L5D6 327 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 TRMT11Q7Z4G4 463 aaKnown RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF410Q86VK4 478 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 HOGA1Q86XE5 327 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 ZNF619Q8N2I2 560 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 DCLK2Q8N568 766 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 RTL3Q8N8U3 475 aaKnown RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 OR52E1Q8NGJ3 308 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 OR4A16Q8NH70 328 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 SPATA18Q8TC71 538 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 URGCPQ8TCY9 931 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 DYRK2Q92630 601 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 BPIFA2Q96DR5 249 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 DTD2Q96FN9 168 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 RUNDC3BQ96NL0 473 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 ASCL2Q99929 193 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 NYXQ9GZU5 481 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 GFRA4Q9GZZ7 299 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 C3orf14Q9HBI5 128 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 MAD2L2Q9UI95 211 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 SATB2Q9UPW6 733 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 STRAPQ9Y3F4 350 aaKnown RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 PYGO1Q9Y3Y4 419 aa2.71□□□□□ -1.98
SCFD1-213ENST00000554776 DHX29Q7Z478 1369 aaKnown RBP2.71□□□□□ -1.98
SCFD1-213ENST00000554776 NEDD4P46934 1319 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 IGHV4-4A0A075B6R2 117 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 A0A087WZ39 114 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 TMEM129A0AVI4 362 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 KRT87PA6NCN2 255 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CCDC69A6NI79 296 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SRRM4A7MD48 611 aaKnown RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CHUKO15111 745 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SCO2O43819 266 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 LRCH4O75427 683 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 GRAP2O75791 330 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 AP2A2O94973 939 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 CLDN1O95832 211 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 IGLV1-44P01699 117 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SLC4A1P02730 911 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ABHD2P08910 425 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 PCP11498 1178 aaKnown RBP2.7□□□□□ -1.98
SCFD1-213ENST00000554776 ODC1P11926 461 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 GAP43P17677 238 aa2.7□□□□□ -1.98
SCFD1-213ENST00000554776 SLC1A3P43003 542 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms