RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TICAM1Q8IUC6 712 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 STOML3Q8TAV4 291 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 OSTF1Q92882 214 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 S100PBPQ96BU1 408 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 NXPE2Q96DL1 559 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 DNAJC27Q9NZQ0 273 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF670-ZNF695F2Z2N8 137 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SLC19A2O60779 497 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SOX14O95416 240 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 VNN2O95498 520 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF20P17024 532 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SLC3A1Q07837 685 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 LAPTM4AQ15012 233 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 UNC50Q53HI1 259 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 ALG1LQ6GMV1 187 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 RAB11FIP2Q7L804 512 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 KCT2Q8NC54 265 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 CAMKVQ8NCB2 501 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 FNDC8Q8TC99 324 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 CREB3L1Q96BA8 519 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SCGB3A2Q96PL1 93 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 ST14Q9Y5Y6 855 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 C13orf42A0A1B0GVH6 325 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 TMEM150CB9EJG8 249 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 LSAMPQ13449 338 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 PON3Q15166 354 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 RNF130Q86XS8 419 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 ZDHHC14Q8IZN3 488 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 AKAP1Q92667 903 aaKnown RBP eCLIP13.49□□□□□ -0.25
VTI1B-204ENST00000554659 ABCG4Q9H172 646 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 RETREG1Q9H6L5 497 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 CYTH4Q9UIA0 394 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SLC45A1Q9Y2W3 748 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
VTI1B-204ENST00000554659 C2orf92A0A1B0GVN3 265 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 POP7O75817 140 aaKnown RBP13.49□□□□□ -0.25
VTI1B-204ENST00000554659 CHAF1BQ13112 559 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 GPR17Q13304 367 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 GRB7Q14451 532 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 UGT8Q16880 541 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 C1orf220Q5T0J3 134 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 ZFAND4Q86XD8 727 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SYNPOQ8N3V7 929 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 OR52E4Q8NGH9 312 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 SPATA9Q9BWV2 254 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 REEP4Q9H6H4 257 aa13.49□□□□□ -0.25
VTI1B-204ENST00000554659 RHPN2P1A8MT19 583 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF878C9JN71 531 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 J3QLW9 94 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF19P17023 458 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 RFC2P35250 354 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 LIPJQ5W064 366 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 TMEM236Q5W0B7 351 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 TCEANCQ8N8B7 351 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 CNIH3Q8TBE1 160 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 TRUB1Q8WWH5 349 aaKnown RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 MRGPRX2Q96LB1 330 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 ADAD1Q96M93 576 aaKnown RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 SLC38A3Q99624 504 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 NLGN3Q9NZ94 848 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 NOP16Q9Y3C1 178 aaKnown RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 FCER2P06734 321 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 HAPLN1P10915 354 aaPredicted RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 EPCAMP16422 314 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 MAT2AP31153 395 aaKnown RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 JAG1P78504 1218 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 ST3GAL4Q11206 333 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 ENPP2Q13822 863 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 FAM189A2Q15884 450 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 ZNF423Q2M1K9 1284 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 CTC1Q2NKJ3 1217 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 GPRC6AQ5T6X5 926 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 Q6ZVU0 165 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 GNPDA2Q8TDQ7 276 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 BEX2Q9BXY8 128 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 OR51B5Q9H339 312 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 BEX1Q9HBH7 125 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 TMEM5Q9Y2B1 443 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 OAZ2O95190 189 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 MT-ND5P03915 603 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 GSTT2P0CG29 244 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 RPS3P23396 243 aaKnown RBP eCLIP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 BLKP51451 505 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 TRAM2Q15035 370 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 ENAMQ9NRM1 1142 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 PAK1IP1Q9NWT1 392 aaPredicted RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 OARD1Q9Y530 152 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 SH3PXD2BA1X283 911 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 A8MV72 311 aaPredicted RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 AOC2O75106 756 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 RPP14O95059 124 aaKnown RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 UQCRC2P22695 453 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 MAPK3P27361 379 aaPredicted RBP13.48□□□□□ -0.25
VTI1B-204ENST00000554659 CCKBRP32239 447 aa13.48□□□□□ -0.25
VTI1B-204ENST00000554659 DGKEP52429 567 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms