RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PRB1P04280 392 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CCDC175P0C221 793 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 ZSCAN5DPP0CG00 497 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 ETS1P14921 441 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 LIFP15018 202 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 TPH1P17752 444 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 MSH3P20585 1137 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 PCSK6P29122 969 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 AKT1P31749 480 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 FOXN2P32314 431 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 FDFT1P37268 417 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 LIPAP38571 399 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 HADHAP40939 763 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 GRIA1P42261 906 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 PDE1BQ01064 536 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CACNG1Q06432 222 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 SEMA5AQ13591 1074 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 ITIH4Q14624 930 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 POU6F1Q14863 301 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 RPS6KA1Q15418 735 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 LINC00303Q3SY05 128 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 MANEAQ5SRI9 462 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 FNBP1LQ5T0N5 605 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 FCRLBQ6BAA4 426 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CAPRIN2Q6IMN6 1127 aaKnown RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 RGS7BPQ6MZT1 257 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF534Q76KX8 674 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF551Q7Z340 670 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 SERPINA9Q86WD7 417 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 LRRC8AQ8IWT6 810 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 PIANPQ8IYJ0 282 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF843Q8N446 348 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 OR13J1Q8NGT2 312 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 PPP1R35Q8TAP8 253 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 LKAAEAR1Q8TD35 194 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 STYXQ8WUJ0 223 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 HEXDCQ8WVB3 486 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 UBE2Q2Q8WVN8 375 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 C1orf54Q8WWF1 131 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CXorf40BQ96DE9 158 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 WBP1Q96G27 269 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CDKN2AIPNLQ96HQ2 116 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 ZNF514Q96K75 400 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 TTC25Q96NG3 672 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 TGM7Q96PF1 710 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 RANBP9Q96S59 729 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CCNL2Q96S94 520 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 COPS8Q99627 209 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CTRCQ99895 268 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 SPRY4Q9C004 299 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 BRINP2Q9C0B6 783 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 RAB33BQ9H082 229 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 WWP1Q9H0M0 922 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 OR52A5Q9H2C5 316 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 COG4Q9H9E3 785 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 SLC40A1Q9NP59 571 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 FBXO8Q9NRD0 319 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 IMP3Q9NV31 184 aaKnown RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 SLC39A1Q9NY26 324 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 RNF7Q9UBF6 113 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 EPHA6Q9UF33 1036 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 SLC2A6Q9UGQ3 507 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 CRLS1Q9UJA2 301 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 GUCA1BQ9UMX6 200 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 PSMD13Q9UNM6 376 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 TMEM184BQ9Y519 407 aaPredicted RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 PRSS21Q9Y6M0 314 aa4.02□□□□□ -1.77
VTI1B-203ENST00000554636 TLN1Q9Y490 2541 aaKnown RBP4.02□□□□□ -1.77
VTI1B-203ENST00000554636 LOC101059948A0A1B0GTJ6 334 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CCDC162PA2VCL2 907 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 GOLGA6L3A6NEY3 463 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ERI2A8K979 691 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 QSOX1O00391 747 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 TOX3O15405 576 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PSMD3O43242 534 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 STK17BO94768 372 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 NXPH3O95157 252 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 GOT2P00505 430 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 IFNB1P01574 187 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 FGGP02679 453 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PTMAP06454 111 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 FESP07332 822 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 SLC35G4P0C7Q5 338 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ATP1B2P14415 290 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 AMD1P17707 334 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 MSNP26038 577 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 NDUFS1P28331 727 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 STIP1P31948 543 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 RPL22P35268 128 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 HALP42357 657 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ARCN1P48444 511 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 PPM1FP49593 454 aaPredicted RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 KPNA2P52292 529 aaKnown RBP4.01□□□□□ -1.77
VTI1B-203ENST00000554636 UCP3P55916 312 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 LOXL3P58215 753 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 RAB1AP62820 205 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 ACVR1Q04771 509 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 KRTAP1-1Q07627 177 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 CDH17Q12864 832 aa4.01□□□□□ -1.77
VTI1B-203ENST00000554636 SNX1Q13596 522 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms