RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 MLNRO43193 412 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 KIF5CO60282 957 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 SLC2A2P11168 524 aaPredicted RBP4.5□□□□□ -1.69
CHD8-207ENST00000554384 SOX3P41225 446 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 FRKP42685 505 aaPredicted RBP4.5□□□□□ -1.69
CHD8-207ENST00000554384 XGP55808 180 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
CHD8-207ENST00000554384 CSNK2BP67870 215 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 MYL7Q01449 175 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 TRIM29Q14134 588 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 KBTBD12Q3ZCT8 623 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 PDLIM3Q53GG5 364 aaPredicted RBP4.5□□□□□ -1.69
CHD8-207ENST00000554384 PWWP2BQ6NUJ5 590 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 Q6ZSR9 355 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 PHLDB2Q86SQ0 1253 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 PRUNE1Q86TP1 453 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 CLYBLQ8N0X4 340 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 MARVELD2Q8N4S9 558 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 SLC26A7Q8TE54 656 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 UBLCP1Q8WVY7 318 aaPredicted RBP4.5□□□□□ -1.69
CHD8-207ENST00000554384 CENPTQ96BT3 561 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 FBXO17Q96EF6 278 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 FAM218AQ96MZ4 157 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 TSSK2Q96PF2 358 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 LITAFQ99732 161 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 MTMR12Q9C0I1 747 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 C10orf88Q9H8K7 445 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 TMEM161AQ9NX61 479 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 FBXL5Q9UKA1 691 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 POMT2Q9UKY4 750 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 NCKAP1Q9Y2A7 1128 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 TCF20Q9UGU0 1960 aaKnown RBP4.5□□□□□ -1.69
CHD8-207ENST00000554384 PARD3Q8TEW0 1356 aa4.5□□□□□ -1.69
CHD8-207ENST00000554384 C1orf167Q5SNV9 1468 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 MBD5Q9P267 1494 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 RIMS2Q9UQ26 1411 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 A0A087WUV0 522 aaPredicted RBP4.49□□□□□ -1.69
CHD8-207ENST00000554384 A0A087WW49 117 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 A0A0B4J203 849 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 LRRD1A4D1F6 860 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 ANKDD1BA6NHY2 528 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 SDR42E2A6NKP2 422 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 TEX28O15482 410 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 ATP9AO75110 1047 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 CLDN1O95832 211 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 PAK4O96013 591 aaPredicted RBP4.49□□□□□ -1.69
CHD8-207ENST00000554384 GLIPR1P48060 266 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 CLDN17P56750 224 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 TMEM187Q14656 261 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 PTPN14Q15678 1187 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 SLC10A5Q5PT55 438 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 KLHL10Q6JEL2 608 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 ARHGAP11AQ6P4F7 1023 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 PSRC1Q6PGN9 363 aaPredicted RBP4.49□□□□□ -1.69
CHD8-207ENST00000554384 DHRS11Q6UWP2 260 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 LEKR1Q6ZMV7 388 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 HOGA1Q86XE5 327 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 CCDC60Q8IWA6 550 aaPredicted RBP4.49□□□□□ -1.69
CHD8-207ENST00000554384 TCEANCQ8N8B7 351 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 NIPA2Q8N8Q9 360 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 OR5AP2Q8NGF4 316 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 FAM76AQ8TAV0 307 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 ARHGAP45Q92619 1136 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 SNRNP40Q96DI7 357 aaKnown RBP4.49□□□□□ -1.69
CHD8-207ENST00000554384 LRR1Q96L50 414 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 PANX3Q96QZ0 392 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 CUEDC2Q9H467 287 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 TBC1D13Q9NVG8 400 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 TMEM181Q9P2C4 612 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 MAN1B1Q9UKM7 699 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 PRDM4Q9UKN5 801 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 AGTPBP1Q9UPW5 1226 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 WDR37Q9Y2I8 494 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 COLEC10Q9Y6Z7 277 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 DLC1Q96QB1 1528 aa4.49□□□□□ -1.69
CHD8-207ENST00000554384 IL16Q14005 1332 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 NOS1P29475 1434 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 ADAMTS13Q76LX8 1427 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 PRR23D1E9PI22 279 aaPredicted RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 NPIPA3F8WFD2 350 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 PGRMC2O15173 223 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 KINO60870 393 aaKnown RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 KHDRBS3O75525 346 aaKnown RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 ZNF821O75541 412 aaPredicted RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 CRCPO75575 148 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 CALCAP01258 141 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 PRR23D2P0DMB1 279 aaPredicted RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 UROSP10746 265 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 HOXB6P17509 224 aaKnown RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 RPL35AP18077 110 aaKnown RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 ELAVL4P26378 380 aaKnown RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 RBMS1P29558 406 aaKnown RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 OR1D5P58170 312 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 FKBP1BP68106 108 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 AKAP17AQ02040 695 aaKnown RBP4.48□□□□□ -1.69
CHD8-207ENST00000554384 TRA2AQ13595 282 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD8-207ENST00000554384 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.48□□□□□ -1.69
CHD8-207ENST00000554384 ADAMTSL4-AS1Q5T5F5 129 aa4.48□□□□□ -1.69
CHD8-207ENST00000554384 Q6ZRP5 223 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms