RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 DUS3LQ96G46 650 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 TRAPPC9Q96Q05 1148 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 C1orf50Q9BV19 199 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 NPLQ9BXD5 320 aaPredicted RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 REXO4Q9GZR2 422 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 AICDAQ9GZX7 198 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 ACSS1Q9NUB1 689 aaPredicted RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 LYARQ9NX58 379 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 MS4A12Q9NXJ0 267 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 SUCOQ9UBS9 1254 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 CIDEBQ9UHD4 219 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 BCAP29Q9UHQ4 241 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 EXO1Q9UQ84 846 aaKnown RBP10.38□□□□□ -0.75
PABPN1-203ENST00000553960 PCDHA9Q9Y5H5 950 aa10.38□□□□□ -0.75
PABPN1-203ENST00000553960 ASXL3Q9C0F0 2248 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 LY6G6EA0A0G2JKS1 128 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 B4DGG1 531 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 CTSVO60911 334 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 LRP3O75074 770 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 TGFB1P01137 390 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 FURINP09958 794 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 POLR2CP19387 275 aaPredicted RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 DDCP20711 480 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 MAGP20916 626 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 HIST1H1TP22492 207 aaPredicted RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 PPIBP23284 216 aaKnown RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 HNRNPH1P31943 449 aaKnown RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 S100A3P33764 101 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 HPCAL1P37235 193 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 GCGRP47871 477 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 LSSP48449 732 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 NUDT2P50583 147 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 WNT3P56703 355 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ACTR3P61158 418 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 PSME3P61289 254 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 SKP1P63208 163 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 PHC1P78364 1004 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ELF3P78545 371 aaPredicted RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 KLC1Q07866 573 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 RBBP5Q15291 538 aaKnown RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 MAPKAPK3Q16644 382 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 FAM174BQ3ZCQ3 159 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 VPS26BQ4G0F5 336 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 TCTE1Q5JU00 501 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 LAIR1Q6GTX8 287 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ADNP2Q6IQ32 1131 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 TMEM214Q6NUQ4 689 aaKnown RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ARMC6Q6NXE6 501 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ZC3H14Q6PJT7 736 aaKnown RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 LAYNQ6UX15 382 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 CEP68Q76N32 757 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ASPGQ86U10 573 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 GPR180Q86V85 440 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ULK2Q8IYT8 1036 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 DEFB107AQ8IZN7 70 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 FAM13CQ8NE31 585 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 VPS37AQ8NEZ2 397 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 OR10G6Q8NH81 332 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 WDR48Q8TAF3 677 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 C16orf78Q8WTQ4 265 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 KLHL6Q8WZ60 621 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 JADE3Q92613 823 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 MCUR1Q96AQ8 359 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 TM4SF18Q96CE8 201 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 MTFMTQ96DP5 389 aaKnown RBP10.37□□□□□ -0.75
PABPN1-203ENST00000553960 MVB12AQ96EY5 273 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 ITCHQ96J02 903 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 SLC41A2Q96JW4 573 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 SLC38A3Q99624 504 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 NRTNQ99748 197 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 SPATA9Q9BWV2 254 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 OR51B5Q9H339 312 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 LYRM4Q9HD34 91 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 EVA1BQ9NVM1 165 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 UCKL1Q9NWZ5 548 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 SLC7A8Q9UHI5 535 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 HCN4Q9Y3Q4 1203 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 NEUROG3Q9Y4Z2 214 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 U3KQA8 63 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 UNC13CQ8NB66 2214 aa10.37□□□□□ -0.75
PABPN1-203ENST00000553960 GABRR3A8MPY1 467 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 H3BMH7 237 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 AIM2O14862 343 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 FOXD2O60548 495 aaPredicted RBP10.36□□□□□ -0.75
PABPN1-203ENST00000553960 KCNH1O95259 989 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 ZBTB11O95625 1053 aaPredicted RBP10.36□□□□□ -0.75
PABPN1-203ENST00000553960 GP1BAP07359 652 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 CKMT1AP12532 417 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 CD1EP15812 388 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 ATP5A1P25705 553 aaKnown RBP10.36□□□□□ -0.75
PABPN1-203ENST00000553960 DUSP3P51452 185 aaPredicted RBP10.36□□□□□ -0.75
PABPN1-203ENST00000553960 MAZP56270 477 aaKnown RBP10.36□□□□□ -0.75
PABPN1-203ENST00000553960 SLC25A3Q00325 362 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 BNIP2Q12982 314 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 SUZ12Q15022 739 aaKnown RBP10.36□□□□□ -0.75
PABPN1-203ENST00000553960 PROX2Q3B8N5 592 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 MMEL1Q495T6 779 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 PAGE3Q5JUK9 113 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 SPANXN4Q5MJ08 99 aa10.36□□□□□ -0.75
PABPN1-203ENST00000553960 TRIM40Q6P9F5 258 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms