RNA–Protein interactions for RNA: ENST00000553513.1

PCNX4-206, Transcript of pecanex 4, humanhuman

TSL 4

Gene PCNX4, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-206ENST00000553513 GPC3P51654 580 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 GEMP55040 296 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 MTTPP55157 894 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 CCZ1BP86790 482 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 CCZ1P86791 482 aaPredicted RBP3.5□□□□□ -1.85
PCNX4-206ENST00000553513 CDH18Q13634 790 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 GIT2Q14161 759 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 IRGCQ6NXR0 463 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 WDR88Q6ZMY6 472 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 C9orf139Q6ZV77 190 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 FCRLAQ7L513 359 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 ANKRD33Q7Z3H0 272 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 NFE4Q86UQ8 179 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 CNPY4Q8N129 248 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 CCDC185Q8N715 623 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 TMEM99Q8N816 258 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 TCEANCQ8N8B7 351 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 MAPKAPK5-AS1Q8N8E1 139 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 SLC37A3Q8NCC5 494 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 TMEM185AQ8NFB2 350 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 SLC24A4Q8NFF2 622 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 TM9SF4Q92544 642 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 ZNF274Q96GC6 653 aaPredicted RBP3.5□□□□□ -1.85
PCNX4-206ENST00000553513 RBM41Q96IZ5 413 aaKnown RBP3.5□□□□□ -1.85
PCNX4-206ENST00000553513 EPSTI1Q96J88 318 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 NODALQ96S42 347 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 PRMT1Q99873 361 aaKnown RBP3.5□□□□□ -1.85
PCNX4-206ENST00000553513 CARD9Q9H257 536 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 DCLRE1BQ9H816 532 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 RAVER2Q9HCJ3 691 aaKnown RBP3.5□□□□□ -1.85
PCNX4-206ENST00000553513 NGBQ9NPG2 151 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 TBC1D13Q9NVG8 400 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 TAS2R3Q9NYW6 316 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 POLKQ9UBT6 870 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 DBF4Q9UBU7 674 aaPredicted RBP3.5□□□□□ -1.85
PCNX4-206ENST00000553513 COPS7AQ9UBW8 275 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 SELENOKQ9Y6D0 94 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 CLCA3PQ9Y6N3 262 aa3.5□□□□□ -1.85
PCNX4-206ENST00000553513 RGSL1A5PLK6 1076 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 CCL24O00175 119 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 OGTO15294 1046 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 FGF17O60258 216 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 KIF5CO60282 957 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 CIDEAO60543 219 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 CDK2AP2O75956 126 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 AKR7A3O95154 331 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 CRYAAP02489 173 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 PRSS1P07477 247 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 IGHV4-38-2P0DP08 117 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 RALAP11233 206 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 KRT3P12035 628 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ANPEPP15144 967 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ITGA3P26006 1051 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 RBMS1P29558 406 aaKnown RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 CEACAM8P31997 349 aaPredicted RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 CHRNA3P32297 505 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SLC6A12P48065 614 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SLC26A5P58743 744 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 PRKCEQ02156 737 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 GCNT1Q02742 428 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 RBM39Q14498 530 aaKnown RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 KARSQ15046 597 aaKnown RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 TRADDQ15628 312 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 DDI2Q5TDH0 399 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 C12orf60Q5U649 245 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SNRNP48Q6IEG0 339 aaKnown RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ZNF770Q6IQ21 691 aaPredicted RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SLC27A4Q6P1M0 643 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ISLR2Q6UXK2 745 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 DLEU7Q6UYE1 221 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 C15orf52Q6ZUT6 534 aaKnown RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 RFPL4BQ6ZWI9 263 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ANO5Q75V66 913 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SLC16A9Q7RTY1 509 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ADAMTSL2Q86TH1 951 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 LCA5Q86VQ0 697 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 STHQ8IWL8 128 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 FAM89BQ8N5H3 189 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 OR52E1Q8NGJ3 308 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 OR13C5Q8NGS8 318 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ARHGAP45Q92619 1136 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 FCGR1BQ92637 280 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SYAP1Q96A49 352 aaPredicted RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 TMEM186Q96B77 213 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SLCO4A1Q96BD0 722 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 IL12RB2Q99665 862 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 NKX3-1Q99801 234 aaPredicted RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 SPAG8Q99932 426 aaPredicted RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ACPTQ9BZG2 426 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 VIPAS39Q9H9C1 493 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 C3orf14Q9HBI5 128 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 UBE2TQ9NPD8 197 aaPredicted RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 MRPL17Q9NRX2 175 aaKnown RBP3.49□□□□□ -1.85
PCNX4-206ENST00000553513 PIGVQ9NUD9 493 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 ACOXLQ9NUZ1 547 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 PANK4Q9NVE7 773 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 HACD3Q9P035 362 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 FAM153AQ9UHL3 310 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 BLOC1S6Q9UL45 172 aa3.49□□□□□ -1.85
PCNX4-206ENST00000553513 DNPEPQ9ULA0 475 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms