RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 HIST1H2AHQ96KK5 128 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 HIST1H2AJQ99878 128 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 H2AFJQ9BTM1 129 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 SGPP1Q9BX95 441 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 UCK2Q9BZX2 261 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 PARVBQ9HBI1 364 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 PRDM9Q9NQV7 894 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 ADAMTS6Q9UKP5 1117 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 PDE10AQ9Y233 779 aa13.26□□□□□ -0.29
CHMP1A-210ENST00000551981 TCRBV16S1A1N1A0A5B0 115 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 FAM221AA4D161 298 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 SLC16A5O15375 505 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 F7P08709 466 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 ZNF888P0CJ79 500 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 NPPBP16860 134 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 CLCN2P51788 898 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 TERF1P54274 439 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 MBOAT1Q6ZNC8 495 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 STRA8Q7Z7C7 330 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 MYO1HQ8N1T3 1032 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 NFAM1Q8NET5 270 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 ABHD11Q8NFV4 315 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 MYRIPQ8NFW9 859 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 OR5M3Q8NGP4 307 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 SEC16BQ96JE7 1060 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 FOXC2Q99958 501 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 TMUB1Q9BVT8 246 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 SARGQ9BW04 601 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 TIMMDC1Q9NPL8 285 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 PLSCR2Q9NRY7 297 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 C20orf96Q9NUD7 363 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 HRH3Q9Y5N1 445 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 ABCA2Q9BZC7 2435 aa13.25□□□□□ -0.29
CHMP1A-210ENST00000551981 ZNF407Q9C0G0 2248 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 TRBV11-1A0A0K0K1C0 115 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 TRBC2A0A5B9 178 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 URADA6NGE7 173 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 SDR42E2A6NKP2 422 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 ACOT7O00154 380 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 ITGA10O75578 1167 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 PDE9AO76083 593 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 TUBB4AP04350 444 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 RNH1P13489 461 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 MAOAP21397 527 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 MAGEA6P43360 314 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 KCNJ1P48048 391 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 GPR85P60893 370 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 PPP2R2AP63151 447 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 BTG2P78543 158 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 FOLH1Q04609 750 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 DHX9Q08211 1270 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 PMPCAQ10713 525 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 TERF2Q15554 542 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 TMEM139Q8IV31 216 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 CCDC71Q8IV32 467 aaPredicted RBP13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 SPNS2Q8IVW8 549 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 B3GNT7Q8NFL0 401 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 OR4K1Q8NGD4 311 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 OR52N2Q8NGI0 321 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 NT5CQ8TCD5 201 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 EEF1AKMT1Q8WVE0 214 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 NINJ1Q92982 152 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 CCDC77Q9BR77 488 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 AARSD1Q9BTE6 412 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 SLC6A16Q9GZN6 736 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 XAB2Q9HCS7 855 aaKnown RBP13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 ZFP69BQ9UJL9 534 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 FBXW2Q9UKT8 454 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 GUCA1BQ9UMX6 200 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 ERVK-11Q9UQG0 969 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
CHMP1A-210ENST00000551981 IGKV3D-11A0A0A0MRZ8 115 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 ZCWPW2A0A1B0GU75 182 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 A8MUA0 341 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 KLK8O60259 260 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 DNAJB6O75190 326 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 MYO1DO94832 1006 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 B3GALT4O96024 378 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 FGGP02679 453 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 MLNP12872 115 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 SSR4P51571 173 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 IST1P53990 364 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 NUP107P57740 925 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 PLGLB1Q02325 96 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 GPS1Q13098 491 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 CSHL1Q14406 222 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 TRIP13Q15645 432 aaPredicted RBP13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 DUPD1Q68J44 220 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 RGS9BPQ6ZS82 235 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 KIAA0408Q6ZU52 694 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 MDGA2Q7Z553 956 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 CAND1Q86VP6 1230 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 TGIF2LYQ8IUE0 185 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 GPALPP1Q8IXQ4 340 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 APCDD1LQ8NCL9 501 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 UTP15Q8TED0 518 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 VMP1Q96GC9 406 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 SNF8Q96H20 258 aa13.23□□□□□ -0.29
CHMP1A-210ENST00000551981 FAM167BQ9BTA0 163 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms